Pantoea phytobeneficialis: CTZ24_06575
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Entry
CTZ24_06575 CDS
T09899
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ppho
Pantoea phytobeneficialis
Brite
KEGG Orthology (KO) [BR:
ppho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppho03009
]
CTZ24_06575
Enzymes [BR:
ppho01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CTZ24_06575
Ribosome biogenesis [BR:
ppho03009
]
Prokaryotic type
ribosomal protein modification factors
CTZ24_06575
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
QGR06090
LinkDB
All DBs
Position
complement(1425630..1426955)
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AA seq
441 aa
AA seq
DB search
MSHVTNPPRVGFVSLGCPKNLVDSERILTELRTEGYDVVPRYDDAEIVIVNTCGFIDSAV
QESLEAIGEALNENGKVIVTGCLGAKVDQIREVHPKVLEITGPHSYEQVLSHVHHYVPKP
EHNPFLSLVPQQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLDSRPIGEVLDEAKR
LVEAGVKELLVISQDTSAYGVDVKHRTGFWNGSPVKTSMVSLCEQLAKLGVWVRLHYVYP
YPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGAVERTLERIKRWREICPELTL
RSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFQYSPVEGATANQLPDQVPEEVKQERF
ERFMQLQQQISAERLQEKIGREILVIIDEVDEEGAVGRSMADAPEIDGAVYLNGDRQVKV
GDVVRVKVEHADEYDLWGSRV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagccatgtcaccaatcctccacgcgtgggctttgtctcactcggctgcccaaaaaac
ctcgttgactcggaacgtatcctgacggaactgcgtaccgaaggttatgacgtggtacca
cgctatgatgacgcggagatcgtcattgttaacacctgtggatttatcgacagcgccgtg
caggaatccctggaagcgattggtgaagcgttgaacgagaacgggaaagtgatcgtcacc
ggctgccttggtgccaaagtggatcaaatccgcgaagtgcacccgaaggtgttggaaatc
accggtccccacagctacgagcaggtgctgtcacacgttcatcactatgtgccgaagcca
gagcacaacccgttcctcagcctggtgccgcagcagggcgtgaagctgacgccgcgccac
tatgcctacctgaagatttcggaaggctgcaaccatcgctgtaccttctgcatcatcccg
tcaatgcgtggcgatcttgatagccgcccgattggcgaggtactggacgaagccaaacgt
ctggtggaagccggtgtgaaagagctgctggtcatttctcaggacacctccgcctacggc
gtcgatgttaagcatcgtaccggattctggaacggttccccggtgaagaccagcatggtc
agcctgtgtgaacaactggcaaaacttggcgtctgggtgcgcctgcactacgtctaccct
tacccacatgtggatgatgtcattccgctgatggctgaaggtaagatcctgccgtacctc
gacattccgctgcaacacgccagcccgcgtattctgaagctgatgaagcgcccgggtgcg
gtagaacgtacgctggagcgtattaagcgctggcgtgaaatttgcccggaactgacgctg
cgttccacctttatcgtcggcttcccgggagaaaccgaggaagatttccagatgctgctc
gacttcctgaaagaagcgcgtctggatcgtgtcggctgcttccagtacagcccggttgaa
ggcgcgaccgccaaccagctgccggatcaggtaccggaagaggtgaagcaggaacgtttc
gaacgctttatgcagctgcaacagcagatctcggctgaacgtctgcaagagaaaattggc
cgcgaaattctggtgatcatcgatgaagtcgatgaagaaggagcggtcggtcgcagcatg
gccgatgcgccagaaatcgatggtgcggtctacctgaacggcgatcgtcaggtgaaagtc
ggtgacgtggtgcgcgtcaaagtggaacacgccgacgaatacgatctttggggttcacgc
gtttaa
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