Pantoea phytobeneficialis: CTZ24_12250
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Entry
CTZ24_12250 CDS
T09899
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
ppho
Pantoea phytobeneficialis
Pathway
ppho00330
Arginine and proline metabolism
ppho00480
Glutathione metabolism
ppho01100
Metabolic pathways
ppho01110
Biosynthesis of secondary metabolites
ppho04148
Efferocytosis
Module
ppho_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
ppho00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
CTZ24_12250
09106 Metabolism of other amino acids
00480 Glutathione metabolism
CTZ24_12250
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
CTZ24_12250
Enzymes [BR:
ppho01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
CTZ24_12250
BRITE hierarchy
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QGR07148
LinkDB
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Position
2615438..2617585
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AA seq
715 aa
AA seq
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MTPLKIAASAAVAPNLSLNTMRDVVTLDNTDFTDVAAVVVSLADTRSGVLALLRHTGFNL
PVFVANAFDEEVLQLPGVVAEINGAPEEWDALEEAAQAYEAELLPPFFDTLTRYVDMQNS
TFACPGHQGGAFFKKHPAGRQFYEFYGENVFRSDMCNADVKLGDLLIHEGSAKDAQKYAA
KVFNADKTYFVLNGTSSANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLEA
ARNPFGFIGGIDAHCFDEAYLREQVKKVAPKRAKEQRPFRLAIIQLGTYDGTVYNARQVV
DRIGHLCDYILFDSAWLGYEQFIPLMEGCSPLTLELNENDPGIFVTQSVHKQLAGFSQTS
QIHKKDNHLRGQKRFCPHKRLNNAFMLHASTSPFYPLFAALDINARMHQGEAGRSMWHEC
VTLGIDARKAILERCEMILPFLPEQVHGKPWQAAETEAIAADPAYFSFEPGAKWHGFSGY
ASEQYLVDPCKLLLTTPGIDAASGEYTEFGIPATILANYLRENGIVPEKCDLNSILFLLT
PAESAEKMAHLVAMLEQFEQHVKEDALLAEVLPSVYRKNMARYQGYTLRRLCQEMHDLYV
SYGVKDLQKAMFREACFPPVKVNPQDAHQAYIRGDVELVPIAKAEGRIAAEGALPYPPGV
LCVVPGEVWGGAVQRYFLALEEGINLLPGFSPELQGVYTEEDDSGRKHLVANMMV
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgacaccactgaaaattgctgccagcgctgctgtagcgccaaacctgagcctgaacacc
atgcgcgacgtggtgacgctggacaatactgactttaccgacgtagcggctgttgtcgtc
tctttggcagatacgcggagtggcgtgttggcgttgttgcgccataccggcttcaatctg
ccggtgttcgttgccaatgcctttgacgaagaggtgctgcaactgccgggcgtcgttgcc
gagatcaacggtgcaccggaagagtgggacgcgttggaagaagcggcgcaagcttatgaa
gcggaactgctgccaccgttctttgacaccctgacacgctatgttgatatgcaaaacagc
acctttgcctgtccggggcatcagggcggcgccttcttcaaaaagcatccggctggtcgt
caattctatgaattctatggcgaaaacgtcttccgttccgatatgtgcaacgcggatgtc
aaactgggcgatttgctgatccacgaaggctcagccaaagacgcacagaaatatgcggcc
aaagtcttcaacgccgataaaacctatttcgtgttgaacggcacttccagcgccaacaaa
gtggtgactaacgcactgctgacgcgtggcgatctggtgctgtttgaccgtaacaaccat
aaatccaaccatcatggcgcgttgattcaggccggtgccacgccggtatatcttgaagcg
gcgcgcaacccgtttggctttattggcggtattgatgcgcactgctttgacgaagcatat
ctgcgcgagcaggtaaagaaagtcgcgccgaagcgtgccaaagagcaacgtccgttccgt
ctggcgattatccagctcggcacctacgacggcacggtgtacaacgcacgccaggtggtg
gaccgcattggccatctgtgtgattacatcctgtttgattcggcctggctgggttacgag
caatttatcccgctgatggaaggctgctcaccattgacgctggagctgaacgagaacgat
ccgggaattttcgtcacccagtcggtgcataagcaactggccggtttctcgcaaacctct
caaattcacaagaaagataaccatctgcgtgggcagaaacgtttttgtccccacaagcgc
ctgaacaatgcctttatgctgcacgcctcaaccagcccgttctacccgttgttcgccgcg
ctggatatcaacgcgcgtatgcatcagggcgaggcgggtcgtagcatgtggcacgagtgc
gtcacgctgggcattgatgcacgtaaagcgattctggaacgctgtgagatgatcctgcca
tttctgccggagcaggtgcacggtaaaccgtggcaggcagcggaaacggaggctatcgcc
gccgatccggcttacttcagctttgaaccaggcgcgaaatggcacggattttccggatat
gccagcgagcaatatctggtggatccctgcaaactgttgctgaccacgccgggcattgat
gccgccagcggggaatacaccgagttcggcattccggccaccattctggcgaactacctg
cgtgaaaacggcatcgtgccggaaaaatgcgacctcaactcgattcttttcctgctaacg
ccagcggaaagcgccgagaagatggcgcatctggtcgcgatgctggagcagtttgagcag
cacgttaaagaggatgcgcttctggcggaggtactcccgagcgtgtatcgcaaaaatatg
gcgcgttatcaggggtataccctgcgccgtctgtgccaggaaatgcatgatttgtatgtc
agctatggcgtgaaagatctgcaaaaagccatgttccgcgaagcctgcttcccgccggtt
aaggtgaacccgcaggatgcgcatcaggcatatattcgcggcgacgttgagttagtgccg
attgccaaagcggaaggacgtatcgccgctgagggtgcgttgccttatcctccgggcgtt
ctgtgcgtggtgccgggcgaggtatggggtggggcggtgcagcgctatttcctcgcactg
gaagaaggtattaacctgctgccgggattctcgccggagttgcagggggtttacaccgaa
gaggatgacagcgggcgtaagcatttagtggcgaatatgatggtttga
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