Pantoea phytobeneficialis: CTZ24_12960
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Entry
CTZ24_12960 CDS
T09899
Symbol
garD
Name
(GenBank) galactarate dehydratase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
ppho
Pantoea phytobeneficialis
Pathway
ppho00053
Ascorbate and aldarate metabolism
ppho01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppho00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
CTZ24_12960 (garD)
Enzymes [BR:
ppho01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
CTZ24_12960 (garD)
BRITE hierarchy
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF
Motif
Other DBs
NCBI-ProteinID:
QGR07278
LinkDB
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Position
complement(2784361..2785920)
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AA seq
519 aa
AA seq
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MNRPLSEKPLYIKVHDSDNVAIVVNNQGLPAGTRFDDGLQLTEHVPQGHKVALADIPEQG
AIVRYGEVIGYALRPIAQGSWIEESLVALPEAPPLASLPLANNVPPDLPPLEGYTFEGYR
NADGSVGTRNLLGITTSVHCVAGVVDYVVKIIERDLLPRYPNVDGVVALNHLYGCGVAIN
APAAVVPIRTIHNLALNPNFGGEVMVVSLGCEKLQPERLLTGTPDVQAISLDDNDIVRLQ
DERLVGFGAMVDEILQVAERHLKRLNQRKRETCPASELVIGMQCGGSDAFSGVTANPAVG
FASDLLVRCGATVMFSEVTEVRDAIHLLTPRVVDEATGKRLLEEMAWYDDYLSLGQTDRS
ANPSPGNKKGGLANVVEKALGSIAKSGRSPIVEVLSPGQRPTRRGLIYAATPASDFVCGT
QQMASGITLQVFTTGRGTPYGLAAIPVIKMATRSALAERWHDLMDINAGTIATGEESIEQ
VGWRLFELILDIASARKQTWSDRWGIRNQLAVFNPAPVT
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgacctctaagcgagaaaccgctttatattaaagtgcacgatagcgataacgtc
gccatcgtggtgaataaccaggggctgcctgcgggcacccgctttgacgatgggctgcaa
ctgactgagcatgtgccgcagggccacaaagtcgcgctggctgatattcctgagcagggc
gcgattgtgcgctacggcgaagtgatcggctatgcgctacgtccgattgctcagggcagt
tggattgaagagtcgctggtggcgctgcccgaagcgccccctctcgccagcctgccgctg
gcgaataatgtcccaccggatttaccgccacttgagggttataccttcgaaggctaccgc
aatgccgatggcagcgtgggaacccgtaatcttctcggcatcaccaccagcgtgcattgt
gtcgcgggcgtggtggattacgtggtgaaaattatcgagcgggatctgttgccgcgttat
cccaatgttgatggcgtagtggcgctgaatcacctgtatggttgtggtgtggcgatcaac
gcgccggcggcagtggtaccgattcgcaccattcataacctggcgctgaaccccaatttt
ggcggcgaagtgatggtggttagcctcggttgcgagaaattacagccggaacgcctgctc
accggcacgcccgatgtacaggccatttcgctggacgataacgacattgtgcgtttgcag
gatgagcgtctggtcggcttcggcgcgatggtggatgagattttgcaggtcgctgagcgc
cacctgaagcgactgaatcaacgcaagcgcgaaacctgcccggcttctgagttagtcatc
ggcatgcaatgtggcggcagcgatgcgttttccggtgtcaccgctaacccggcggtgggt
tttgcttctgatttgctggtacgttgcggcgcgacagtgatgttttctgaagtgactgaa
gtgcgcgatgcaatccatctgctgacgccgcgcgtggtcgatgaggcgaccggcaaacgt
ctgctggaagagatggcatggtatgacgactacctcagcctcggtcaaaccgaccggagc
gccaacccctcgcccggcaacaaaaaaggcggcctggcaaatgtggtagaaaaagcgctg
ggatcgattgccaaatcaggccgcagcccgatcgttgaagtgctgtctccaggacagcga
cctaccaggcgcggtttgatctatgcggcgacccccgccagcgattttgtctgcggtaca
cagcagatggcatccggcattacgttgcaggtatttaccaccggtcgcggtacgccgtat
ggtctggcggcaattccggtgatcaagatggctacgcgcagcgcactggctgaacgctgg
catgatctgatggacatcaatgcgggcaccatcgccaccggcgaggagagtatcgagcag
gtgggttggcggttgtttgaactgattctggatattgccagcgcacgtaagcagacatgg
tcagatcgctggggcattcgcaatcagttggcggtgttcaatccggcacccgtgacctga
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