Pannonibacter phragmitetus: APZ00_21340
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Entry
APZ00_21340 CDS
T04214
Name
(GenBank) cobalamin biosynthesis protein CobN
KO
K02230
cobaltochelatase CobN [EC:
6.6.1.2
]
Organism
pphr
Pannonibacter phragmitetus
Pathway
pphr00860
Porphyrin metabolism
pphr01100
Metabolic pathways
pphr01240
Biosynthesis of cofactors
Module
pphr_M00925
Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
APZ00_21340
Enzymes [BR:
pphr01000
]
6. Ligases
6.6 Forming nitrogen-metal bonds
6.6.1 Forming coordination complexes
6.6.1.2 cobaltochelatase
APZ00_21340
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Gene cluster
GFIT
Motif
Pfam:
CobN-Mg_chel
Motif
Other DBs
NCBI-ProteinID:
ALV29278
UniProt:
A0A0U3FSL9
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Position
complement(4684959..4688714)
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AA seq
1251 aa
AA seq
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MHILASQTRRIDDGGDAVDLAQDPADLVFLSAADTELSAFAAAHASLGGDVSLRLASILA
LTHPYSVDLYAEKTLAGSKLVVLRLLGGAGYWSYGLDRLREEVNRNGLQLAVFAGCDKWD
EDLAALSTVPVDAVRRLWRYCIEGGAENYRNALRFCAHLIGRDQEPPLPAPLPRAGIFLP
GHTAPGLDDLTARFADPARPVAALVFYRALVQAGETAPAEALCRHLEGQGLNVLPVFVAS
LKDAESAAVLSALFEALPPAVVLNATAFAVSSGGRVHQPSPLDAPGRPVLQVVFSSSSRA
GWAESTQGLSVRDLAMHVVLPELDGRLMTRAVSFKEEGILDPATQFRPVLFRPEESRMAY
VAALAANWAKLGGKPAAARKVALVLANYPNSDGRIANGVGLDTPASCAALIADLRDAGYD
VPVDAPVTSETLMAHLTAGVTNDIHGRAGRRVDVRFALADYRKAFASLPEAVQAQVAARW
GGPEDDPAVRDGAFELPLTRFGSVYAGIQPARGYNIDPKATYHDPDLVPPHNYFAFYIWL
REVAGIDAVVHLGKHGNLEWLPGKALALSEECYPEAVLGPVPNVYPFIVNDPGEGMQAKR
RASAVIVDHLTPPLTRAENYGVANEMENLLDEYYLASGVDPRRQKVLTRDILELASVHGL
DADIGLTPDMCETTRLARLDAHLCDLKELQIRDGLHVLGESPQGRLLHDLLVALVRVPRG
SRPQDESLIRALARDLLADASDFDPLSCDFSAPWNGPKPELLAGMSDALWRSCGDTVERL
ERLAVLLVSGEMKCPDLTATASVLQEIESTLRPAVAASGSAETAAVLAALDGRFVPPGPS
GAPTRGRPDVLPTGRNFYSVDVRAVPTEIAWRLGQASAAEVALRYFQDEGEWPKALVLTC
WGTANMRTGGDDIAQALALIGARPVWEPGSGRVTGFEIMPLSELRRPRIDVTLRISGFFR
DAFPHQMDLFTSAVRAVAALDEPESANPMAARVRAERAELQARGLARDDAFAEASIRVFG
SMPGAYGAGLQALMDEGIWQGRQDFADAFLAWGSYAYGGGAKGESVRERFETRLSGVDLV
LHNQDNREHDLLDSDDYYQFEGGLAATVEALRGEAPVSYHTDHSRPERPVVRALSEEISR
VVRGRAANPKWIAGVMRHGYKGAFEIAATLDYLFAFAATTRAVREHHFDQLYTAYIEDAA
VREFLARANPAAYEDILQRFDEAIRRGLWTPRRNSVHAGLSSQLTSQAMRA
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgcatatcctcgcaagtcaaacccggcgaattgatgacggcggcgatgccgtggacctc
gcacaggacccggcggatctggtgttcctgtcggcggccgatacggaactctcggctttc
gccgccgcgcatgcttcccttggcggggatgtgtcactgcggctggccagcattctggcg
ctgacccatccctattccgtcgatctttacgcggaaaagacgctggccggttcaaagctt
gttgtgctgcggctgctgggcggggcgggctactggtcctacgggctggaccggttgcgg
gaggaagtcaaccgcaacggattgcagctggccgtctttgcgggctgcgacaagtgggat
gaggatctggccgctctctccaccgtgccggtggacgccgtgcggcggctatggcgctac
tgcattgaaggtggcgcagagaattaccgcaatgcgctgaggttttgcgctcatctcatt
ggcagggatcaggagccgcccctgcctgcaccgttgccgcgtgcgggcatcttcctgccc
ggccacaccgcaccggggctcgatgatctgacggcccgcttcgcagatccggcaaggccg
gtggcggcgctggtcttctaccgggcgctggtgcaggcgggcgagacggcgcctgccgag
gcgctctgccgtcatctggaggggcaggggctcaacgtgctgcccgtcttcgtggcctcg
ctgaaggatgcggaatcggccgccgtgctgtcggccctgttcgaggcgctgccgcccgct
gtggtgctgaatgcgacggcctttgccgtgtccagtggcgggcgcgtgcatcagccgtca
ccgctggatgcgccgggccgcccggtactgcaggtggtcttctcctcctcctcgcgggcg
ggctgggccgaaagcacgcaaggcctttccgtgcgcgatctggccatgcatgtggtgctg
ccggagctcgacgggcggctgatgacgcgggcggtatcgttcaaggaagaaggcatcctt
gatcccgccacccagttccgccccgtgctcttcaggcccgaagagagccgcatggcctat
gtggccgctcttgcggcaaactgggcgaagctgggcggcaagcccgctgccgcgcgcaag
gtcgcgctggtgctggcgaattatcccaacagcgacgggcgcattgccaatggtgtgggg
ctggatacgcccgcctcctgcgcggcgctgatcgcggacctgcgggatgcgggttatgac
gtgccagttgatgcgccggttacttccgaaacgctgatggcccatctgacggcgggcgtg
accaatgatatccatgggcgcgccgggcgccgggtggatgtgcgctttgcgcttgcggat
taccgcaaggcctttgcgtccctgccggaggcggtacaggcgcaggtggcggcgcgctgg
ggcgggccggaagatgaccctgccgtgcgcgatggcgctttcgagctgccgctgacccgc
tttggcagcgtctatgccggcattcagcccgcgcgtggctacaacatcgacccgaaggcg
acctatcacgatccggatctggtgccgccgcacaactactttgccttttacatctggctg
cgcgaggtggccggtatcgatgccgtcgtgcatctcggcaagcacggcaatctggaatgg
ctgccgggcaaggcgctggcgctgtccgaagaatgctacccggaagccgtgctgggaccg
gtgccgaacgtctatcctttcattgtcaatgatccgggcgagggcatgcaggccaagcgg
cgggcctctgccgtaattgtcgatcacctgacgccgccactgacgcgggcggagaattat
ggcgttgccaatgaaatggaaaacctgctcgatgaatattaccttgcgagcggtgttgat
ccgcgccggcagaaggtgctgacgcgggacattctggagcttgcttccgttcacgggctt
gatgcggatatcggcctgacgccggacatgtgcgagacgacccgtctggcgcggctggat
gcgcatctgtgtgacctcaaggaattgcagatccgcgacgggctgcatgtgctgggcgag
agcccgcaggggcggctgctgcatgacctgctggtggcactggtgcgcgtgccgcgtggc
agcaggcctcaggatgaaagcctgatccgggcgctggcgcgtgatctgctcgccgatgcg
tcagatttcgatccgctgtcctgcgatttttccgccccctggaatgggccgaagccggag
cttctggcgggcatgtctgatgccctgtggcgctcttgtggtgacacggtggagcggctt
gaaagactggctgttcttcttgtctccggggaaatgaaatgtccggatctgactgcgaca
gcttctgttcttcaggagattgaatccactttgaggcctgccgtcgccgcctccggatct
gcggaaacagcggcggttctggcggcgctggatggccgtttcgtgccgccggggccgtct
ggcgcgccgacgcggggccggccggatgtgctgccgacgggccggaatttctattcggtc
gatgtgcgcgccgtgccgaccgagattgcctggcggctgggtcaggcttcggcggcggaa
gtggcgctgcgctactttcaggatgagggcgagtggcccaaggcgctggtgctgacctgc
tggggcaccgccaacatgcgcaccggcggcgatgacattgcgcaggcgctggcactgatc
ggcgcaaggccggtgtgggagccgggctccgggcgtgtcaccggctttgaaatcatgccc
ctgtcggagctgcgccgtccgcgcatcgacgtgacgctgcgcatctccggtttcttccgc
gatgccttcccgcatcagatggacctgttcaccagtgcggtgcgggcggtggccgcgctc
gacgagcctgaaagcgccaatccgatggccgcgcgggtgcgggccgagcgggcggagctg
caggcgaggggccttgcccgggatgatgcctttgccgaggcctccatccgtgtgttcggc
tccatgcccggtgcctatggtgccggtcttcaggcgctgatggatgaggggatctggcag
gggcgtcaggatttcgccgatgccttcctcgcctggggctcctatgcctacggcggcggg
gcgaaaggcgagtcggtgcgcgagcgcttcgagacgcgcctgagcggcgtcgatctggtg
ctgcacaatcaggacaaccgcgagcatgacctgctcgacagcgacgattactaccagttc
gagggcgggcttgcggcaacggtcgaggcgctgaggggggaggcgcccgtcagctatcac
accgatcattcgcggcccgagcggccggtggtgcgggcgctgtcggaggagatttcccgc
gtggtgcgcggccgggcggcgaacccgaagtggatcgccggggtcatgcgccacggctac
aagggcgccttcgagatcgccgcgacgctggattatctctttgccttcgccgcgacgaca
agggcagtgcgcgagcatcatttcgatcagctttacaccgcctatatcgaggatgccgcc
gtgcgggagtttctggcccgtgccaatcctgccgcctatgaggacattctccagcgtttt
gacgaagcgatccggcgcgggctctggacgccgcgccgcaactccgtccatgctggcctc
tccagccagctcacatcccaagccatgagggcctga
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