Pannonibacter phragmitetus: APZ00_22495
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Entry
APZ00_22495 CDS
T04214
Name
(GenBank) fumarate lyase
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
pphr
Pannonibacter phragmitetus
Pathway
pphr00362
Benzoate degradation
pphr01100
Metabolic pathways
pphr01120
Microbial metabolism in diverse environments
pphr01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
APZ00_22495
Enzymes [BR:
pphr01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
APZ00_22495
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Motif
Pfam:
Lyase_1
ADSL_C
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ALV29467
UniProt:
A0A0U3NDP3
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Position
4926803..4928143
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AA seq
446 aa
AA seq
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MTVSPFDSPLLSGLLQDGETAALFSDAAALAAMLEVEAALALAQGDCGLIPHEAAKAISA
AARHLTLDPAALSAATAQDGVPVPALVAALRKAVSADHAPFVHWGATSQDIADTGLVLRL
SQLADLFETRLRDLSRLLLRMAEAHRATPMAAHTRMQQATPTSFGLKAAVWLAPLLAHLE
RLAQLRPRLLRLSLGGASGNLAALAPHGLAVEAKLAERLGLTISPVPWHVSRDGLIEFAG
WCALVTGSLGKTGQDIALLSQNEIGELRPGSGGGSSTMPNKANPVGAEVLIALARYTGGQ
LGTLQQAAIAEYERSGAAWLIEWLSLPQIAAATGKALTTATSLLDSLVIDTARMRANIEA
SNGLLLAEAASFALAATMPRPQAQDLVKKACATVLSSGTHLFDVLAAMTPVPADWSSLKD
PALHMGEAAALIDRIMESAQALGLES
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcagccccttcgattcccctctcctctccggcctgctgcaggatggtgaaaca
gcggcgctgttcagcgatgctgccgcccttgcggccatgctggaggtggaggcagcgctg
gcgctggcgcaaggggactgcggcctcattccgcacgaagctgcgaaggcgatcagcgcg
gccgcaagacacctgacgctggacccggcagcgctgtcggcggccactgcgcaggacggc
gtgcccgtgccggcgctggtcgcggccctgcgcaaggcagtatctgcagaccatgccccc
ttcgtccattggggcgcgaccagtcaggacatcgccgacaccggtctggtgctgcggctg
tcgcaactggcagaccttttcgaaacgcgcctgcgtgacctttcccggctgctgctgcgc
atggctgaagcgcaccgggcaacacccatggcggcgcacacccgcatgcagcaggcaact
cccacaagcttcggcctgaaggccgccgtgtggctggcaccgctgctggcgcatctggaa
cgtcttgctcaattgcgcccgcgcctgctccgcctgtcgctgggcggggcgtcgggcaac
cttgccgcgctggccccgcatgggctggcggtggaggcaaagctcgccgaacggctgggt
ctcacaatttcgcccgtgccctggcatgtgagccgcgacgggctgatagaatttgcaggc
tggtgtgccctcgtcaccggcagcctcggcaagaccgggcaggacatcgcccttctctcc
cagaacgaaatcggcgagctgcgccccggcagcggcggcggctcgtccaccatgcccaac
aaggccaacccggtgggcgccgaagtgctgatcgccctcgcccgttacaccggcggccag
ctcggcaccctgcagcaggcagccatcgccgagtatgagcgcagcggcgcggcctggctg
atcgagtggctgagcctgccgcagatcgctgccgccaccggcaaggcgctcaccacagcc
accagcctgctggacagcctcgtcatcgacaccgcccgcatgcgcgccaacatcgaggca
agcaacggcctgctgctggcagaggcagcaagctttgcgctcgccgccaccatgccccgt
ccgcaggcgcaagatttggtaaagaaagcctgtgctacagtcctgtccagcggcacccat
ctcttcgatgtgctggccgccatgaccccggttcccgctgactggagctccctcaaggac
cctgcgctccatatgggtgaagcggcggcgctgatcgaccggattatggagtcggctcag
gcacttggcctggagagctga
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