Candidatus Pelagisphaera phototrophica: GA004_00775
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Entry
GA004_00775 CDS
T09061
Name
(GenBank) YjhG/YagF family D-xylonate dehydratase
KO
K22396
xylonate dehydratase [EC:
4.2.1.82
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht00040
Pentose and glucuronate interconversions
ppht01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
GA004_00775
Enzymes [BR:
ppht01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.82 xylonate dehydratase
GA004_00775
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ILVD_EDD
Motif
Other DBs
NCBI-ProteinID:
QXD32296
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Position
160500..162440
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AA seq
646 aa
AA seq
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MLLLRELLDSQDPEIYKLQTHASGPGGSLPLAGDQLRGMASGDFFGMTQNAGMGWDPKQL
LGKQFLILSTQGGLRAPNGSPIALGYHTGHWEIGMLVEEASKAFSKEGAIPFAAYCSDPC
DGRTNGTVGMLDSLPYRNDAATVFRRQIRSLPTRRGVVGIATCDKGLPAMLMALAGTPTL
PTILVPGGVTLLAEEGEDAGKVQTLPTRFAHQEVDLEYAAEMGCKACGTPGGGCQFMGTA
ATSQVVAEALGLTLPHAALAPSGAAIWKDLARRSAKALIELEAKQKTTAEILTDDSIYNA
MVVHAAVGGSTNLVLHIPAIAHAAGLRQPTVEDWARINRSVPRIVDSLPNGPKHFATVQV
FLAGGVPEIMLHLREMGLLKLDALTVTGATLGENLEWWESTERRTVLKDKLRMLDGIDPD
EVIMSPTKAKQRGLTSTVTFMQGNLAPEGALVKSTAISPDRIDGDGFYRHEGPARVMTSE
AEAIEAIKSGKVQLNDTIILIGIGPGCGMPETYQITSALKHMKGGESIALITDGRFSGVS
TGACIGHVSPEAWAGGPIGCVLDGDVIRVEIDTNHLQGSVDILSIDARELAERSINPALK
PDPRVPADTRLWAALQNASGGSWSGCVYDADRISELLEKGLEAEGR
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgctactcctccgcgaactgctcgattcccaagacccggaaatatacaagctccagaca
catgcctccggacccggaggctcccttccgttagcaggcgatcaactgagaggcatggcc
agcggcgactttttcggaatgacgcaaaacgcgggtatgggctgggacccgaaacagctc
cttggaaagcagtttcttatcctcagtacgcaaggcggactgcgagcgcctaatggctcg
cctatagcgctgggttatcataccggacattgggaaatcggaatgctagtcgaggaagcg
tcgaaagcattctcgaaggaaggagcaattccgttcgccgcctactgtagcgacccttgt
gacggccggaccaatggaacagtcggaatgcttgacagcctcccctaccgaaacgacgcc
gccactgtatttcgaaggcagatacgatcgctcccgacccgtcgaggagttgtcggtatc
gcgacctgcgacaagggtctcccggcaatgcttatggctttggcggggacgccaacattg
ccgacgattctggtgccgggaggagtcactcttttggccgaggaaggagaagacgctgga
aaagtgcaaacgcttccgactcgattcgcccaccaagaggttgatctcgaatatgcagca
gaaatgggatgcaaagcctgcggcactccaggaggtggatgccagtttatgggtacggcg
gcaaccagccaagtcgtcgccgaagcgctcggcctcaccttgccccacgcggcgctcgct
cccagcggtgccgctatctggaaggacctggcccgccgttccgccaaggcattgatcgag
ctcgaagcaaagcagaaaaccaccgccgaaatcctgacagacgactcaatctacaacgcc
atggttgtgcatgctgcggttggaggatccactaatcttgtccttcacattccggccatt
gctcatgccgccgggttacgacagccaaccgtcgaagactgggcccgcatcaaccgttcc
gttccccgaatcgtcgattcattgccaaacgggcccaagcacttcgcaactgttcaggtt
tttctcgcgggaggtgtacccgaaattatgttacacttgcgagaaatggggctgctgaaa
ctcgacgccttgaccgtgaccggggctactctgggtgaaaatcttgagtggtgggaatcc
acagaacgccgcaccgtattaaaggataaactgagaatgctagacggaatcgatccggac
gaagtaatcatgtcccctactaaagccaagcaacgcggattgacgagtacggtgactttt
atgcagggcaatttggccccagagggcgccttggtcaaaagtacggccatttctccggat
agaatcgatggcgacggattctatagacatgaaggccctgcccgggtcatgacgagcgaa
gcagaggcgattgaagcgatcaagtcgggaaaggttcagctaaacgacaccattatcctt
attgggatcgggcccggctgtggcatgccggaaacatatcagatcacctccgcccttaag
cacatgaaagggggcgagagtatcgctttaattactgacggccgcttctccggtgtctcc
accggagcctgtatcggccacgtcagtcctgaggcctgggccggcggacccattggatgt
gttctagacggcgatgttattcgagtcgaaatcgacaccaatcacttgcagggatccgta
gatattttgtcgatcgatgcgagggaactagcggagcgctccattaatcctgccctaaaa
cccgatcctcgagtccccgccgacacgcgactatgggccgcccttcagaatgcgagcggt
ggctcctggtccggatgcgtctacgacgccgaccgaatttccgaattgctagagaaggga
ctcgaagcagagggccgatag
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