Candidatus Pelagisphaera phototrophica: GA004_00855
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Entry
GA004_00855 CDS
T09061
Symbol
dcm
Name
(GenBank) DNA (cytosine-5-)-methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht00270
Cysteine and methionine metabolism
ppht01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
GA004_00855 (dcm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppht03000
]
GA004_00855 (dcm)
03032 DNA replication proteins [BR:
ppht03032
]
GA004_00855 (dcm)
03036 Chromosome and associated proteins [BR:
ppht03036
]
GA004_00855 (dcm)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
ppht02048
]
GA004_00855 (dcm)
Enzymes [BR:
ppht01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
GA004_00855 (dcm)
Transcription factors [BR:
ppht03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
GA004_00855 (dcm)
DNA replication proteins [BR:
ppht03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
GA004_00855 (dcm)
Chromosome and associated proteins [BR:
ppht03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
GA004_00855 (dcm)
Prokaryotic defense system [BR:
ppht02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
GA004_00855 (dcm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Met_10
DUF6864
Motif
Other DBs
NCBI-ProteinID:
QXD32309
LinkDB
All DBs
Position
complement(178612..179598)
Genome browser
AA seq
328 aa
AA seq
DB search
MFTFIDLFAGIGGFRIGLERLGGRCVFSSEIDKHAAATYERNFGEKPSGDITQIDASDVP
DHDVLCGGFPCQPFSVSGKQLGFEDARGTLFFEVMRLVSEKRPRAVFLENVANYARHSNG
DTLKRTLSMLEGEGYRTKHAILNASDYGVPQARKRLYIVGIREDVVRGEFRFPQPAGKKV
SVLDILLPKSKVESTAIVRNDITITDTNVGKDLGARSEKPIQIGVINKGGQGERIYSPEG
QGITLSAHGGGAAAKTGAYLVDGVVRKLHPVECLRMMGFPDSFKIDPRVGQAYKQFGNAV
VASVIEAIGKEMLDAAKLKWEQAVLELK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgttcacctttatcgatttatttgctggcattggtggatttcgcattgggttggaacga
ttgggcggacggtgcgtttttagctcggaaatcgacaagcacgcagcggcaacctatgaa
cggaatttcggagaaaaaccgtcgggtgatataacccaaatcgatgcttcagatgtcccg
gatcatgacgtgctatgtggaggttttccctgccagccgttttcggttagtggaaagcag
ctgggattcgaagatgcccggggaacgttgtttttcgaagtgatgcggctggtctctgag
aaaagaccaagggctgtgtttcttgaaaacgtagccaattatgcgcgacacagtaacgga
gatacgttgaaaaggacgctatcgatgctggaaggcgaagggtataggaccaagcacgct
attctaaacgcgtccgattacggggttccccaggcacgcaagcgtttgtacatcgtgggt
atcagggaagatgttgtgaggggcgagtttagatttccgcagccagcaggaaagaaggtg
tcggtactggacatattgcttccaaaatcaaaagttgaaagtacggcgatcgttcgtaac
gacattacgattacggataccaatgttggaaaggacttgggggcaagatctgaaaaaccg
atccaaattggagtcattaataaaggggggcagggtgagcggatctattcgcccgaaggt
cagggtatcactctttctgcccatggtggcggagccgcagccaaaaccggtgcctacctg
gtggatggtgtagtgcgcaaattgcaccccgttgagtgccttcgcatgatgggtttcccc
gatagcttcaaaattgatccacgcgtcgggcaagcctataagcaatttggcaatgccgtc
gtcgcctctgtgattgaggcgattggcaaggaaatgttagacgcggcaaaattaaaatgg
gaacaggccgttttggagcttaaataa
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