Candidatus Pelagisphaera phototrophica: GA004_01215
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Entry
GA004_01215 CDS
T09061
Name
(GenBank) succinate dehydrogenase/fumarate reductase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht00020
Citrate cycle (TCA cycle)
ppht00190
Oxidative phosphorylation
ppht00650
Butanoate metabolism
ppht01100
Metabolic pathways
ppht01110
Biosynthesis of secondary metabolites
ppht01120
Microbial metabolism in diverse environments
ppht01200
Carbon metabolism
Module
ppht_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppht_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GA004_01215
00650 Butanoate metabolism
GA004_01215
09102 Energy metabolism
00190 Oxidative phosphorylation
GA004_01215
Enzymes [BR:
ppht01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
GA004_01215
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GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_7
Fer4_10
Fer2
Fer4_2
Fer4_9
Fer4_6
Fer4
Fer4_21
Fer4_15
Fer4_4
Fer4_3
Fer4_17
Fer4_13
Motif
Other DBs
NCBI-ProteinID:
QXD32378
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Position
complement(241542..242306)
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AA seq
254 aa
AA seq
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MKVTLRVWRQKDGNSKGNFEEYQAEGLNPNMSFLEMLDVVNEDLTVKGEDPIAFAYDCRE
GICGTCSCMIDGKPHGPENGITTCQTYMRSFKDGDLITVEPFRASGFPVQKDLITDRSAF
DTIMQSGGFITARVGSCEDANALPVGKEVADLAMDAAACIGCGACVAACKNSSAMLFVSA
KAGQLNLLPQGQPEKDKRVLNMVATMDEAGFGNCTNQYECSAACPKLISEEFISKLNRDY
VSASVKNLFKAKSL
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaacactacgagtttggcgacaaaaagacggcaattctaaaggaaacttcgag
gaataccaggcggaagggctgaatccgaacatgtcctttctggagatgctagatgtggtc
aacgaggacttgacggtaaaaggtgaagacccgatagcgtttgcttacgactgtagggaa
ggcatatgtggaacttgttcctgcatgattgatggtaaaccacatggtccagaaaacggt
atcactacgtgccaaacctacatgcgcagtttcaaggacggggatttgattacagtcgag
ccttttagggctagtggctttccggtgcagaaggatttgatcacggacaggtcggccttt
gatacgattatgcaatcgggaggtttcatcacagctcgggtgggtagttgtgaagatgcc
aacgcgttgcctgtcggtaaggaagtggctgatttggcgatggacgcggccgcatgtatt
ggctgcggcgcgtgtgtggcagcctgcaagaattcctcagcgatgctgtttgtgtcagcc
aaagcgggccaactcaatttactccctcaaggtcagccggagaaagacaagcgggtgctc
aatatggtcgcgacgatggatgaagcgggattcggtaattgcacgaaccagtacgagtgc
tcggcagcttgtcctaagctgatcagcgaagagtttatctccaaactgaatcgcgactac
gtgtccgcgagcgttaagaacctgttcaaagccaaatcgctttag
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