Candidatus Pelagisphaera phototrophica: GA004_04025
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Entry
GA004_04025 CDS
T09061
Symbol
pcaB
Name
(GenBank) 3-carboxy-cis,cis-muconate cycloisomerase
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht00362
Benzoate degradation
ppht01100
Metabolic pathways
ppht01120
Microbial metabolism in diverse environments
ppht01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
GA004_04025 (pcaB)
Enzymes [BR:
ppht01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
GA004_04025 (pcaB)
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Motif
Pfam:
Lyase_1
ADSL_C
ASL_C2
Motif
Other DBs
NCBI-ProteinID:
QXD32892
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Position
complement(889579..890901)
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AA seq
440 aa
AA seq
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MMNSSDDRLDVLSSEQRLKAMLVVEAALAVALHKSGIISEKQADAISEACASESFDANAI
YANGSKSGTPVIPLVKEIVAHARSKSEEAARFVHFGATSQDILDTATVLQLQEVVSQICR
QLLKVESAFVNLAEEHSKTIALGRTLLQPGPPISFGLKVASWKAAVRRCRQRLETSASSA
LVLQFGGAVGNLSSLDKKGMHVAKHLAEELELPLPDAPWHAHRDRLVELASATGILVGSL
GKIARDISLHCQGEVGELREASTPVKGGSSAMPHKRNPVGCMRVLAAANQAPGLVSSLLS
AMPQEHERGLGGWQSEWPTLKTLFAAAELASVAMVEVSEGLEVDVARMKANLDATQELIF
SERLSSALLPKLGRLEAQKLVGNLVAQSIEQDRPLSRLASEEPTIQSALDEDSLERVFDI
EQALGSSEELLIRLLKRKRS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgatgaattcctcagacgatagattggacgttttgtcctcggagcaaaggctcaaagcc
atgcttgtagtagaggccgcgctggcggttgctctacataagtcaggaatcatttccgag
aaacaggctgatgcgatctcggaggcgtgcgcttcagaatcgtttgacgcaaatgccatc
tatgccaatggttcaaaatccggaactcctgttatcccactggttaaagaaattgtcgcc
cacgctcgtagcaagtccgaagaagctgcacgcttcgttcacttcggcgcgactagtcag
gatattttggatacagctactgtcctgcagttacaggaagtcgttagtcaaatttgccgt
cagttgctcaaagtagaatcggccttcgtaaacctggcggaggaacactctaagacgata
gccttgggacgaacccttctccagccggggccgcctataagtttcggcctcaaggttgcc
tcctggaaagcagctgtcaggcgatgtagacaacgtttggagacgtcggcaagcagtgca
ctcgttttgcaattcggtggagcggttgggaacttatctagtcttgataaaaagggaatg
catgtcgccaagcatttggctgaagaattggaactacccctgccagacgctccctggcac
gctcatcgtgatcggctggttgaactagcatcggcgactggaattttggtcggtagcttg
ggtaaaattgcccgcgacatctcgctccattgccagggagaggttggcgagctacgggaa
gcatcaacgcctgtcaaaggcggctcctcggctatgccgcacaaacgcaatccggtcggt
tgcatgcgggttcttgcggcagctaatcaggcccctgggttggtctcgtctctgctatca
gctatgccgcaggaacacgaacgcggacttggcggttggcagtccgagtggcctacactc
aagacgctgttcgcggctgctgagttagcctcggtagcgatggttgaggtttcggaaggt
ttggaagtcgatgtcgctaggatgaaggctaatttggatgccacgcaggagcttatattt
tccgaacgactttcgtctgccctcctgcccaaattgggccgactggaggcgcaaaaattg
gttgggaaccttgtggctcaatcgattgagcaagataggcccttatctaggttagcctca
gaagagccgactattcaatccgccctcgatgaagatagtttggagagggtattcgatatc
gaacaagccttgggctcgagcgaagaactcttaattcgtctactgaaaaggaaacgttcc
tga
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