Pseudomonas putida ND6: YSA_04556
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Entry
YSA_04556 CDS
T02170
Name
(GenBank) UbiD family decarboxylase
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi00130
Ubiquinone and other terpenoid-quinone biosynthesis
ppi01100
Metabolic pathways
ppi01110
Biosynthesis of secondary metabolites
ppi01240
Biosynthesis of cofactors
Module
ppi_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
YSA_04556
Enzymes [BR:
ppi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
YSA_04556
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
AFK69241
UniProt:
I3UUS0
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All DBs
Position
complement(2474706..2476172)
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AA seq
488 aa
AA seq
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MQYRDLRDFIRGLEQRGELKRIQVPISPVLEMTEVCDRTLRAKGPALLFEKPTGFDIPVL
GNLFGTPERVAMGMGAESVSELREIGKLLAFLKEPEPPKGLKDAWSKLPIFKKVVSMAPK
VVKDAVCQEVVVEGDDVDLGTLPIQHCWPGDVAPLITWGLTVTRGPNKDRQNLGIYRQQV
IGRNKVIMRWLSHRGGALDYREWCEKNPGQPFPVAVALGADPATILGAVTPVPDTLSEYA
FAGLLRGNRTELVKCRGSNLQVPATAEIILEGVIHPGEMAPEGPYGDHTGYYNEVDSFPV
FTVERITHRQKPIYHSTYTGRPPDEPAILGVALNEVFVPILQKQFPEITDFYLPPEGCSY
RMAVVTMKKQYPGHAKRVMLGVWSFLRQFMYTKFVIVTDDDINARDWNDVIWAITTRMDP
KRDTVMIDNTPIDYLDFASPVSGLGSKMGLDATHKWPGETTREWGRVIVKDEAVTRRIDE
LWDQLGID
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatcgcgacttgcgcgacttcatccgtggcctggaacagcgcggcgagctcaag
cgcatccaggtaccgatctcccccgtcctggaaatgaccgaggtctgcgaccgcaccctg
cgcgccaagggcccggcattgctgttcgaaaagcccaccggcttcgacatccccgtgctc
ggcaacctgttcggtaccccggagcgggtggcgatgggcatgggcgccgagtcggtcagc
gaactgcgggaaatcggcaagctgctggccttcctcaaggagcccgagccgcccaagggc
ctgaaggacgcctggtcgaagctgccgatcttcaagaaggtcgtgtcgatggcgccaaaa
gtggtcaaggacgcggtgtgccaggaagtggtggtcgagggtgacgatgtcgaccttggc
acgctgccgattcagcactgctggcctggcgacgtggcgccgctgattacctggggcctc
accgtgacccgtggcccgaacaaggaccgccagaacctgggcatctaccgccagcaggtg
atcggccgcaacaaggtgatcatgcgctggctcagccaccgtggcggcgccctcgactac
cgagagtggtgcgagaagaaccccggccagccgtttccggtcgccgtggccctgggcgct
gacccggcgaccattctcggcgccgtgaccccggtcccggacaccctttccgagtacgcc
ttcgccggcctgctgcgaggcaatcgcaccgagctggtcaagtgccgtggcagcaacctg
caggtaccggcaaccgccgagatcattctggaaggggtgatccacccaggcgaaatggcc
ccggaaggcccttacggcgatcacacgggctactacaacgaagtggacagtttcccggtg
ttcaccgttgagcgcatcacccaccggcaaaaaccgatctaccacagcacctacaccggc
cggccgccagatgagccggccattctcggcgtggcgctgaacgaagtgttcgtgccgatc
ctgcagaagcagttcccggaaatcaccgacttctacctgccgccggaaggctgctcgtac
cggatggcggtggtgaccatgaagaaacagtacccaggccacgccaagcgcgtaatgctg
ggtgtgtggtcgttcctgcgacagttcatgtacaccaagttcgttattgtcaccgatgac
gatatcaacgctcgtgactggaacgatgtgatctgggccattaccacgcgcatggacccc
aagcgtgatacggtaatgattgacaataccccgatcgactacctggactttgcgtcaccg
gtgtcggggctgggttcgaagatgggcctggacgctacgcacaagtggccgggcgagact
acacgcgaatggggccgggtcatcgtcaaggatgaggccgtcacccgccgtatcgatgag
ctgtgggatcagttgggaatagattga
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