KEGG   Pseudomonas putida ND6: YSA_06049
Entry
YSA_06049         CDS       T02170                                 
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
ppi  Pseudomonas putida ND6
Pathway
ppi00740  Riboflavin metabolism
ppi01100  Metabolic pathways
ppi01110  Biosynthesis of secondary metabolites
ppi01240  Biosynthesis of cofactors
ppi02024  Quorum sensing
Module
ppi_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:ppi00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    YSA_06049
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    YSA_06049
Enzymes [BR:ppi01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     YSA_06049
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     YSA_06049
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: AFK70039
UniProt: I3UX18
LinkDB
Position
3268562..3269698
AA seq 378 aa
MNMPSQAAILDAHYMARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAE
VHALRQAGELARGACAYVTLEPCSHHGRTPPCAEALVKAGVTRVVAAMQDPNPQVAGQGL
RRLAEAGIEVASGVLEAEARALNPGFLKRMEHGLPFVRAKLAMSLDGRTAMASGESQWIT
GPAARSAVQRLRARSSVVLTSAASVLADNARMTVRGAELGLDAETAALALSRTPLRVLVD
GRLRLPLAAPFFQAGPALVVTAVADDPRYAAAGHELLSLPGDNGQVDLAALLRALAARGV
NEVLLEAGAGLVGAFARQGLVDEYQLFVAGTFLGSQARPLLDWPMDKMSEAPRLKITEMR
AVGDDWRVTAIPLPAPGV
NT seq 1137 nt   +upstreamnt  +downstreamnt
gtgaacatgcccagccaagctgccattctcgacgcccactacatggcccgcgcgctggag
ctggcgcgtaaaggcctgtacaccacccacccgaacccgcgcgtaggctgcgtgatcgtg
cgtgatggtgaagtggttggcgaaggttggcacgttcgcgccggcgagcctcatgccgaa
gtgcatgccctgcgccaggccggtgaacttgcccgcggtgcttgtgcctacgtcaccctg
gaaccatgcagccatcatggccgtacgccaccgtgtgccgaggcactggtcaaggccggc
gtgacgcgtgtcgtagccgccatgcaggaccctaacccgcaagtggcgggacagggcctg
cggcgcctggccgaagccggaatcgaagtggccagcggagtgctcgaagccgaggcccgc
gccctcaacccaggcttcctcaagcgcatggagcacggcctgccgttcgttcgcgccaag
ctggccatgagcctggacggccgcacggccatggccagtggtgaaagccagtggatcacc
gggccggccgcgcgctcagccgtgcagcgcttgcgcgcccgctccagcgtggtgctgacc
agcgccgccagcgtgctggcagacaacgcacgcatgaccgtgcgtggcgccgagctgggc
ctggatgccgaaacagccgccctggcactcagccgcacacccttgcgggtgctggtcgat
ggccgcctgcgcctgccactggcggcgccgttcttccaggcgggcccagcgctggtggtg
actgctgtcgcagatgacccgcgctatgccgctgccggccacgaattgctcagcttgccg
ggcgacaatggccaggtcgacctggcggcgctgcttcgcgccctggctgcccgcggcgtc
aacgaagtcctgctggaagccggtgccggcctggtcggtgcctttgcacggcaaggcctg
gtcgacgagtaccagctgttcgtcgctggcaccttcctcggctctcaggcccggccgctg
ctggactggccgatggacaagatgagcgaagcaccacggctgaaaattaccgaaatgcgc
gcagtgggcgatgactggcgggtcacggccatccccctgccagcacccggcgtataa

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