Pseudomonas putida ND6: YSA_11257
Help
Entry
YSA_11257 CDS
T02170
Name
(GenBank) diguanylate phosphodiesterase
KO
K26148
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
ppi
Pseudomonas putida ND6
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
YSA_11257
Enzymes [BR:
ppi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
YSA_11257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
CSS-motif
Motif
Other DBs
NCBI-ProteinID:
AFK72878
UniProt:
I3V557
LinkDB
All DBs
Position
6015122..6016708
Genome browser
AA seq
528 aa
AA seq
DB search
MPLTAKRRAALSWRTLLPWVVGLLPVMCGLAVMNWQVEREMQASSHATTRQALEHVEHIL
DNLSRAANSLLPLTDSSCEQAQLMLRAQVTRNAFVRSTNLFRHNNLYCTSLFGEFDEPVN
PGDYVDGKLWLMDGNSVTPGHPLLVYRANDGDHGAITTVDGDHLLTALRLIGPDEELQIR
VGDAWMGKDGVVHKGVSPAAPSANVLIGSTRYPFSVQGGYSADKQGQLLRSHYPGLLSLL
LVLGALAALACRWQIRRATSPRAELDRALQADEFLPYFQPVVRKGDYRWAGAEVLMRWHH
PREGLVRPDLFIPYAEHSGQIVAMTRALLTHTAQSLAPYAGLLEDGFHIGVNITADHCRD
LSLLDDCRTFLQHFPPGRVVLTLELTERKLIEPTPVTLELFEKLHAMGVMIALDDFGTGQ
SSLNYLRQFKVDYLKIDQSFVAMIGADALSVHILESIIELSGKLDLGIVAEGVETDLQRD
YLAKHGVDFQQGYLFARPMPAAQFLAALATRPGATQLPQDAPPEIMRG
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgccccttaccgccaaacgccgcgccgcactcagctggcgcacgctcttgccttgggtc
gtcggccttctgccggtcatgtgcggcctggccgtgatgaactggcaggtcgagcgtgaa
atgcaggccagcagccacgccaccacccgccaggcgttggagcacgtcgaacacatcctc
gacaacctgtcccgagccgccaattcgctgcttccactgactgacagttcatgcgagcag
gcccagctcatgctacgggcccaggttacccgcaatgccttcgtgcgctcgaccaacctg
ttcaggcacaacaacctgtattgcacctcgctgttcggcgagttcgatgaaccggtcaat
cctggcgattacgtcgacggcaagttatggctgatggacggcaactcggttacgccgggc
cacccgctgctggtctaccgtgccaacgacggcgaccacggcgcaatcaccacggtggat
ggcgaccacctgctgacagcactgcgcctgatcgggcccgatgaagaactgcaaatccgc
gtgggcgacgcgtggatgggcaaggacggcgtggtccacaaaggcgtctcccctgccgcc
cccagcgccaacgtgctgataggctcgacgcgttaccctttcagcgtgcagggcggctac
agtgccgacaagcaaggccaactgttgcgcagccactaccctggcctgctcagtctgttg
ctggtactgggtgccctggcggcgctggcgtgccgctggcagattcgccgcgccacctca
ccgcgtgccgaactggaccgcgccctgcaggccgatgaattcctgccgtattttcagccg
gtggtgcgcaagggggattaccgctgggccggtgcggaagtgctgatgcgctggcaccac
ccacgagaaggcctggttcgccccgacctgttcatcccctatgccgaacacagcgggcag
attgtcgccatgacccgcgcgctgttgacccataccgcgcaaagcctggcgccttatgcc
gggttgttggaagacggcttccatattggtgtcaacatcaccgctgaccactgccgcgac
ctcagcctgctggatgactgtcgcacgttcctgcagcactttccgcccggccgggtggtg
ctgaccctggaactgacagagcgcaagctgatcgagcccacgccggtcacccttgagttg
ttcgaaaagctgcatgccatgggcgtgatgatcgccctcgacgacttcggcaccggccag
tcgagcctcaactacctgcggcaattcaaggtcgactacctgaagatcgaccagagcttc
gttgccatgatcggcgccgatgcgctgtcagtgcacatactcgagagcatcattgaactg
tcaggaaagctggacctgggcatcgtcgccgagggtgtggaaaccgacctgcagcgcgac
tacctggccaagcatggggtggacttccagcagggttacctgttcgccaggcccatgcca
gccgcccagttcctcgcagccttggccacccgcccgggcgcaacgcagttgccgcaagat
gcgccccctgagatcatgcgcggctga
DBGET
integrated database retrieval system
