Phaeobacter piscinae: PhaeoP14_01122
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Entry
PhaeoP14_01122 CDS
T05105
Symbol
fadJ
Name
(GenBank) fatty acid oxidation complex FadJ subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
ppic
Phaeobacter piscinae
Pathway
ppic00071
Fatty acid degradation
ppic00280
Valine, leucine and isoleucine degradation
ppic00310
Lysine degradation
ppic00362
Benzoate degradation
ppic00380
Tryptophan metabolism
ppic00410
beta-Alanine metabolism
ppic00640
Propanoate metabolism
ppic00650
Butanoate metabolism
ppic00907
Pinene, camphor and geraniol degradation
ppic00930
Caprolactam degradation
ppic01100
Metabolic pathways
ppic01110
Biosynthesis of secondary metabolites
ppic01120
Microbial metabolism in diverse environments
ppic01200
Carbon metabolism
ppic01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PhaeoP14_01122 (fadJ)
00650 Butanoate metabolism
PhaeoP14_01122 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
PhaeoP14_01122 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PhaeoP14_01122 (fadJ)
00310 Lysine degradation
PhaeoP14_01122 (fadJ)
00380 Tryptophan metabolism
PhaeoP14_01122 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PhaeoP14_01122 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PhaeoP14_01122 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PhaeoP14_01122 (fadJ)
00930 Caprolactam degradation
PhaeoP14_01122 (fadJ)
Enzymes [BR:
ppic01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PhaeoP14_01122 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PhaeoP14_01122 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PhaeoP14_01122 (fadJ)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
DAO
F420_oxidored
UDPG_MGDP_dh_N
2-Hacid_dh_C
NAD_Gly3P_dh_N
Sacchrp_dh_NADP
Pyr_redox_2
ApbA
NAD_binding_8
Shikimate_DH
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
ATG39234
LinkDB
All DBs
Position
complement(1204659..1206860)
Genome browser
AA seq
733 aa
AA seq
DB search
MSDFTMKKDADGVAIITWDCPGKTMNVLNGQAMIDLDGLVDDALADDAVKGIVITSGKKD
FAGGMDLNVLAKMKEDAGDEPARGLFEGIMKMHEGLRKIERAGMDPKTNKGGKPVAAALP
GTAVGIGLELPLSTHRIFAADNPKAKIGLPEIMVGIFPGAGGTTRLVRKMGAMAAAPFLL
EGKLVDPKKAKGAGIIDEVVEDPLAAARAWVLEAKDADIVKPWDAKGYKMPGGAPYHPAG
FMTFLGAAAMVHGKTFGAFPAAKALLSAVYEGALVPFDTALKIEARWFTHVLMNPSSEAM
IRSLFLNKEALEKGAVRPAGIEDQSVKKIGVLGAGMMGAGIALVSAQAGMEVVLVDRDQD
AADKGKAYTESYLDKGIKRGKVTAEKKEAMLSRITATPDLDTLKGCDLIIEAVFEDPGVK
AEMTKKVEAIIPEDCIFASNTSTLPITDLAEASVRPEQFIGIHFFSPVEKMFLVEIIKGE
KTGDRAVAKALDYVRQIRKTPIVVNDARFFYCNRCIIPYVNEGARMITEGVAPALIDNAA
RQLGFPVGPIQLTDETSIDLGAKIARATKAAMGDAYPESAADDLIFWMEEQGRLGRKSNA
GFFDYDDKGKRQGYWKGMQEKYPQAEEQPDLIEVQERLMFAQVLEAVRALEEGVLMDIRE
GDVGAILAWGFAPWSGGPLSWLDIIGTPYAAERCDQLTAKYGERFTCPPLLREMAEKGQT
FYGRFNPEAEKAA
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatttcacaatgaaaaaagacgccgacggcgtcgccatcatcacctgggactgc
cccggcaagactatgaacgtgctcaacggccaagccatgatcgacctcgacggtctggtc
gatgacgcgctggccgatgacgcggtcaagggcatcgtgatcacctctggcaagaaagac
tttgccggtggcatggaccttaatgtgctggccaagatgaaagaagatgccggtgacgag
cccgcgcggggcctgttcgaaggcatcatgaaaatgcacgaaggtctgcgcaagatcgag
cgtgccggcatggatcccaagaccaacaagggtggcaagccggttgcagcagccctgccc
ggcactgccgttggcatcggtctggaactgccgctgtctacgcatcgcatctttgccgcc
gacaatccaaaggccaagatcggcctgccggagatcatggttggcattttccccggtgct
ggtggcaccacccgtctggtgcgcaagatgggcgccatggcagcggctcccttcctgctg
gaaggcaagctggttgaccccaagaaagccaagggcgctggcatcatcgacgaggttgtc
gaagatccgctggccgctgcgcgcgcctgggttctggaggcgaaagacgccgatatcgtc
aaaccctgggatgcgaagggctacaagatgcccggtggcgcgccgtatcatcctgcgggc
ttcatgaccttccttggtgccgctgcgatggtgcatggcaagaccttcggcgccttcccg
gcggccaaggccctgctgagtgccgtctatgagggcgcgctcgtgccctttgacaccgcg
ctgaagatcgaggcgcgctggttcacccatgtgctgatgaacccctcctccgaggcgatg
atccgctcgctcttcctcaacaaggaagcgctggaaaaaggcgccgtgcgtcctgcgggc
atcgaggatcagtccgtgaagaaaatcggcgttctgggtgctggcatgatgggggcaggc
atcgccttggtctccgctcaggcgggcatggaggttgtgctggttgaccgtgatcaggac
gccgccgacaagggcaaggcctataccgagagctatctcgataagggcatcaagcgcggc
aaagtcaccgccgagaagaaagaggcgatgctgtcacgcatcaccgcaaccccggatctg
gacacgctcaaaggctgtgatctgatcattgaggcggtgtttgaagatcccggcgtcaaa
gccgagatgaccaaaaaggtcgaggcgatcatccctgaggattgcatcttcgcctccaac
acctcgaccctaccgatcacggatctggcggaggcctcggtgcgcccggaacagttcatt
ggcattcacttcttctcgccggtggagaaaatgttcctggtggaaatcatcaaaggtgag
aaaaccggtgaccgcgcggtggccaaggcgctggattatgtgcgtcagatccgcaagaca
ccgatcgtggtcaatgatgcccggttcttctactgcaaccgctgcatcatcccttacgta
aacgaaggcgcacggatgatcaccgagggcgtcgccccggcgctgatcgacaatgctgca
cgtcagctgggcttccccgttgggccgatccaactgaccgatgagacctcgatcgatctg
ggcgccaaaattgcgcgcgccaccaaggcggcgatgggtgatgcctatccggagagtgca
gcggatgacctgatcttctggatggaagaacagggccgtctggggcgcaagtccaacgct
ggtttcttcgactatgacgacaagggtaagcgtcagggctactggaagggcatgcaggag
aaatacccgcaggccgaagagcagcccgatctgatcgaggtgcaggaacgcctgatgttt
gcacaggttctggaagccgtgcgcgcattggaagaaggcgttctgatggacattcgcgaa
ggcgacgtaggcgctattctggcctggggctttgcgccgtggtccggtggtccgctgagc
tggctcgacatcatcggcacgccctatgcggctgagcgctgcgatcagttgaccgcgaaa
tacggtgagcgcttcacctgcccgccacttctgcgggagatggcggagaaaggtcagacc
ttctatggccgcttcaatcctgaggccgagaaggccgcctga
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