Phaeobacter piscinae: PhaeoP14_02222
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Entry
PhaeoP14_02222 CDS
T05105
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ppic
Phaeobacter piscinae
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppic03009
]
PhaeoP14_02222 (rimO)
Enzymes [BR:
ppic01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PhaeoP14_02222 (rimO)
Ribosome biogenesis [BR:
ppic03009
]
Prokaryotic type
ribosomal protein modification factors
PhaeoP14_02222 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
Thioredoxin_6
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ATG40301
LinkDB
All DBs
Position
2348624..2350051
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AA seq
475 aa
AA seq
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MTQTPGSANPPSLRPDLAPKPRLGEAPREGQPTLGMVSLGCPKALVDSERILTRLRAEGY
GVSPDYSGADAVIVNTCGFLDSAKAESLEAIGEALKENGKVIVTGCLGAEPDYIRAHHPR
ILAVTGPHQYEQVLDAVHAAVPPSPNPYVDLLPAAGVKLTPRHFSYLKISEGCNHKCKFC
IIPDMRGKLASRPAHAVLREAEKLVDAGVRELLVISQDTSAYGLDRKYDVNPWKDGELRS
HIQDLSRELGKLAPADELWVRLHYVYPYPHVRELIPLMADPDNALLPYLDIPFQHAHPDV
LRRMARPAAAAKTLDEIKAWRATCPDITLRSTFIVGYPGETEAEFQHLLDWMDEAQLDRV
GCFKYENVDGARSNDLPDHVAEEVKQERWDRFMEKAQAISEAKLAAKVGQTLQVIVDDID
EDGIATCRTKADAPEIDGNLFIDEGTEGLQVGELVTVEVDEAGEYDLWGIIPQDG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgacacagacacccggttccgccaatccgcccagccttcgccccgatcttgcgcccaag
ccccggcttggcgaggcgccccgtgaggggcagccgacccttggcatggtgtccctgggc
tgccccaaggcgctggttgacagtgagcggatcctgacgcggctgcgggctgagggctac
ggcgtgtcgccggattactcaggggcggatgcggtgatcgtgaacacctgcggctttctc
gacagtgccaaggccgaaagccttgaggccatcggtgaggcgctgaaggaaaacggcaag
gtgattgtcaccggctgtctgggcgcagagccggattacatccgcgcgcatcatccgcgc
attctggcggtgaccggcccgcatcaatatgagcaggtgctggatgcggtccatgccgcc
gtgccgccctcacccaacccttacgtagatctgctgccagcagcgggtgtgaagctgacg
ccgcgccacttcagctatctgaagatctccgagggctgcaatcacaagtgcaaattctgc
atcatccccgacatgcgtggcaaactggcgtcccgccctgcccatgcggttttgcgcgag
gcggaaaaactggtggatgctggcgtgcgcgagttgttggtgatttcgcaggatacctcc
gcctatgggctggatcgcaaatatgatgtgaacccgtggaaagacggtgagctgcgcagc
catattcaagatctgagccgcgagctgggcaaactggcccccgcggatgagctgtgggtg
cggctgcactatgtctacccctacccgcatgtgcgtgagctgatcccgctgatggcggat
ccggataacgcgctgctgccctatctggatatcccgttccagcacgcccacccggatgtg
ctgcgccgcatggcgcgcccggcggctgcagccaaaacgctggatgagatcaaggcctgg
cgcgcaacctgcccggatatcaccctgcgctccaccttcatcgttggctaccccggcgag
acagaagctgagttccagcatctcctcgactggatggatgaggcacagctggatcgtgtg
ggctgtttcaaatacgaaaacgtcgatggcgcgcggtcgaacgacctgccggatcacgtt
gccgaagaggtaaagcaggagcgctgggaccggttcatggagaaggcgcaggcgatttcc
gaggcaaagctggcggccaaggtcggccagaccctacaggtgatcgtggacgacatcgac
gaggacggcatcgccacctgccgcaccaaagccgacgcgcctgagatcgacggcaacctg
ttcattgatgagggcaccgaagggctgcaggttggcgagttggtcaccgttgaagttgat
gaggcgggggagtatgatttgtggggaataattcctcaggatggctga
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