Pseudomonas piscis: QL104_06465
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Entry
QL104_06465 CDS
T09652
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ppii
Pseudomonas piscis
Brite
KEGG Orthology (KO) [BR:
ppii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppii03009
]
QL104_06465 (rimO)
Enzymes [BR:
ppii01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
QL104_06465 (rimO)
Ribosome biogenesis [BR:
ppii03009
]
Prokaryotic type
ribosomal protein modification factors
QL104_06465 (rimO)
BRITE hierarchy
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
RNase_II_C_S1
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WMN19050
LinkDB
All DBs
Position
complement(1400440..1401777)
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AA seq
445 aa
AA seq
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MSTPTAPANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDS
AKAESLEVIGEAIKENGKVIVTGCMGVEEGNIRDVHPSVLAVTGPQQYEQVVSAVHEVVP
PKQDHNPLIDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AQRLVKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSTLGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKNWREICPE
LIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLDLEVVPDDVK
QDRWERFMAHQQEISSARLQQRVGKEIEVLIDEVDEQGAVGRCFFDAPEIDGNVFIDNAS
HLKPGDKVRCRVTDADEYDLWAEIL
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccctaccgcgccagccaaccccaaggtcggcttcgtttccctgggttgcccc
aaggctctggtcgactccgagcgcatcctcacccaactgcgcatggaaggctatgacgtg
gtgtccacctaccaggacgccgatgtcgtggtggtcaatacctgtggcttcatcgactcg
gccaaggccgaatccctggaagtgatcggcgaagccatcaaggaaaacggcaaggtcatc
gtgaccggctgcatgggcgtggaagaaggcaacatccgcgatgtgcaccctagcgtgctg
gcggtgaccggcccacagcagtacgagcaagtagtcagcgcggtgcatgaagtggtgcca
ccgaagcaggaccacaatccgctgatcgacctggtgccgccacagggcgtcaagctgacc
ccacggcactacgcctacctgaagatttccgaaggctgcaaccacagctgcagcttctgc
atcatcccgtcgatgcgtggcaagctggtcagccgcccggtgggcgacgtgctcgacgaa
gcccagcgcctggtcaagtccggggtcaaggaactgctggtaatctcccaggacaccagc
gcctatggcgtcgacgtcaagtaccgcaccggcttctggaatggcgcgccggtcaagacc
cgcatgaccgaactctgcgaagccctgagcaccctgggcgtctgggtccgcctgcactac
gtctacccgtatccgcacgtcgacgagctgatcccgctgatggccgccggcaagatcctg
ccgtacttggacatcccgttccagcacgccagcccgaaagtgctcaaggccatgaagcgc
ccggccttcgaggacaagaccctggcccggatcaagaactggcgcgaaatctgccccgag
ctgatcatccgctccaccttcatcgtcggtttccccggcgaaaccgaggaagacttccag
tacctgctggactggctcaccgaagcccagctggaccgcgtcggctgcttccagtattcc
ccggtcgaaggcgctccggccaacgacctggacctggaagtggtgccggatgacgtcaag
caggatcgttgggagcgcttcatggcgcaccagcaggaaatcagctcggcacgcctgcaa
cagcgcgtcggcaaggaaatcgaagtactgatcgacgaagtcgacgagcaaggcgccgtg
ggccgctgcttcttcgatgccccggagatcgacggcaacgtcttcatcgacaatgccagc
catctgaagccgggcgacaaggtccgctgccgggtgaccgacgccgacgagtacgatctc
tgggccgagatcctgtaa
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