Pyramidobacter piscolens: CE91St28_00460
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Entry
CE91St28_00460 CDS
T08073
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ppio
Pyramidobacter piscolens
Brite
KEGG Orthology (KO) [BR:
ppio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppio03009
]
CE91St28_00460 (rimO)
Enzymes [BR:
ppio01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CE91St28_00460 (rimO)
Ribosome biogenesis [BR:
ppio03009
]
Prokaryotic type
ribosomal protein modification factors
CE91St28_00460 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
BDF77252
LinkDB
All DBs
Position
50576..51880
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AA seq
434 aa
AA seq
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MKNLHIISLGCPKNAVDSEHLGGVLEAAGFRLVGSAEEADVALVNTCGFLQAAVEEGIQV
ILDLERLKKAGVVRQIAVVGCMLNRYGDELKAEFPTVDFWAKSEDWGALLREMGRGVPAA
AESGCLRADLAGTPWTRYLKISEGCNSRCSYCAIPGIRGRLRSVPVEQIVGEARRLVDEG
AKELCLVGQELSIYGSDLFGRPSLPRLLDELEKELPRGVWLRLFYLHPSLVDAVFLERVA
ASPVILPWLDIPIQHVDDDVLRRMNRPPVERHIRELFARGREINPDFAFRTTLMVGFPGE
TRAQFDKLLDFVEEIGFDRLGAFPYSPEDGTPAASFPDQIPEEEKTARYNELMELQRQVS
LTRQAHFVGHELNVLIDEVDEETGERVGRSFRDAPEIDGVVTVTGAGRARPGDMIKVKIT
ASSEYDLSGEAIHE
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaacctgcacatcatcagcctcggctgtccgaaaaacgccgtcgacagcgaacat
ctcggcggcgtcctcgaggcggcgggattccgtctcgtcggcagcgccgaggaagccgac
gtcgctttggtcaacacctgcggctttctgcaggcggccgtggaagagggcatccaggtc
atcctcgatctcgaacggttgaaaaaagccggcgtcgtcaggcagatcgccgtcgtcggc
tgtatgctgaaccgctacggcgacgaactgaaagccgagttcccgacggtggatttctgg
gcgaagtcggaggactggggcgcgctgctgcgagagatggggcgcggcgttccggccgcg
gcggaatccggctgcctgcgcgccgacctggcgggcacgccctggacgcgctatctgaaa
atcagcgaaggctgcaacagccgctgttcctactgcgccattcccggcatccgcggccgc
ctgcgcagcgtgccggtggaacagatcgtcggcgaagcgcggcgcctcgtcgatgaaggc
gcgaaagagctgtgcctcgtcggccaggaactgagcatttacggttccgatctgttcggc
cgcccctcgctgccgcgcctgctcgacgagctggagaaggagctgccgcgcggcgtctgg
ctgcgcctgttctatctgcatccctcgctggtcgacgcggtttttctcgagcgcgtcgcc
gccagccccgtgattctgccgtggctcgacatccccatccagcacgtcgacgacgacgtg
ctgcggcgcatgaaccgcccgccggtggagcgccatatccgcgagctgttcgcaagaggg
cgcgagatcaatcccgatttcgccttccgcaccacgctgatggtgggatttcccggcgag
acgcgggcgcagttcgacaagctgctcgacttcgtcgaggagatcggcttcgaccgcctc
ggcgcgttcccctattcgcccgaggacggcacgccggcggcgtcgtttcccgatcagatt
cccgaggaagagaagacggcgcgctacaacgagctgatggagctgcagcggcaggtttcg
ctgacgcggcaggcgcatttcgtcgggcatgagctgaacgtgctgatcgacgaggtcgat
gaggaaacgggcgagcgcgtcggccgctcgttccgcgacgcgccggagatcgacggcgtc
gtcacggtgacgggagcggggcgcgcccggccgggcgacatgatcaaggtgaagatcacc
gcttcgtcggaatatgatttgtcgggagaggcgattcatgaataa
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