Pseudomonas plecoglossicida: RK21_01145
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Entry
RK21_01145 CDS
T03646
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj00500
Starch and sucrose metabolism
ppj01100
Metabolic pathways
ppj01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RK21_01145
Enzymes [BR:
ppj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
RK21_01145
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Glyco_hydro_31_2nd
Motif
Other DBs
NCBI-ProteinID:
AJG12653
UniProt:
A0A099N3X9
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Position
complement(1247393..1249546)
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AA seq
717 aa
AA seq
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MSPRTPKKTRSVAPSRIREGLPFPLGATWDGLGVNFALFSANATKVELCLFDSTGEHEIE
RIELPEYTDEIYHGYLPDAHPGLVYGYRVHGPYEPENGHRFNPNKLLIDPYAKQLVGSLQ
WSEALFGYTIGHPDGDLSFDERDSAPFVPKCKVIDPAFTWGRDQRVQIPWERTIIYEAHT
RGISMRHPAVPEELRGTFAGLANDELLKHIKELGVSSIELLPIHAFVNDQHLLDKGLNNY
WGYNSIAFFAPHPRYLASGKIAEFKEMVAHLHDAGLEVILDVVYNHTAEGNERGPTLSMR
GIDNASYYRLMPDDKRYYINDSGTGNTLDLSHPCVLQLVTDSLRYWAGEMHVDGFRFDLA
TILGRYHDGYSERHGFLVACRQDPMLSQVKLIAEPWDCGPGGYQVGNFAPGWAEWNDRFR
DTVRAFWKGDEGQLADFASRMTASGDMFNNRGRRPYASVNFVTAHDGFTLRDLVSYNHKH
NEDNDENNQDGTDNNLSWNCGVEGPTDDPAVNALRMRQMRNYFATLLLAQGTPMIVAGDE
FSRTQHGNNNAYCQDSEIGWVNWDLDQEGKELLAFVKRLTRLRLAYPVLRRSRFLVGDYN
EAIGVKDVTWLAPDGNEMSVEQWEDPHGRCLGMLIDGRAQVSGIARPGAEATVLLIVNAH
HDIVPFQLPTVPEGDYWSCLVDTDRPELRKGQHLQFDSTFEVKGRSLLLMVLQRDEE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgagcccccgcaccccgaagaaaacccgctcggtcgccccgtcgcgtatccgcgaaggc
ctgcccttccccctcggcgccacctgggatggccttggggtcaactttgccctgttctcg
gccaatgccaccaaggtcgagctgtgcctgttcgactccaccggcgagcacgaaatcgaa
cgcatcgagctccccgaatacaccgacgagatctaccacggctacctgcctgacgctcac
ccagggctggtctacggctaccgcgtgcacggcccgtacgagccggagaacggccaccgc
ttcaaccccaacaaactgctgatcgacccgtatgccaagcaactggtcggcagcctgcaa
tggtccgaagcactgttcggctacaccatcggccaccccgacggcgatctgtcgttcgac
gagcgcgacagcgcgcccttcgtgcccaagtgcaaggtgatcgaccctgcattcacctgg
ggccgcgaccagcgcgtgcagatcccctgggagcgtacgatcatttatgaggcccacacc
cgtggcatcagcatgcgccacccagcggtgccggaagaactgcgcggcaccttcgccggc
ctggccaatgacgagttgctcaagcacatcaaggagctgggcgtttccagcatcgagctg
ctgccgattcacgccttcgtcaacgaccagcacctgctggacaagggcctgaacaactac
tggggctacaacagcatcgccttctttgcgccccacccgcgttacctggccagcggcaag
atcgccgagttcaaggaaatggtcgcacacctgcacgacgccgggctggaggtgatcctg
gatgtggtctacaaccacaccgccgaaggcaacgagcgcggccccacgctgtcgatgcgc
ggtatcgacaacgcctcgtactaccgcctgatgccggacgacaagcgctattacatcaac
gattccggcaccggcaacaccctggacctgagccacccctgcgtgctgcagctggtcacc
gactcgctgcgctactgggccggcgaaatgcacgtggacggcttccgcttcgacctggcg
accatccttggccgctaccacgacggctacagcgaacgccacggcttcctcgtcgcctgc
cgccaggacccgatgctgagccaggtgaagctgattgccgaaccatgggactgcggcccg
ggcggctaccaggtgggcaactttgccccgggctgggcagagtggaacgaccgcttccgc
gacaccgtgcgcgccttctggaaaggcgacgaaggccaactggccgactttgcctcgcgc
atgaccgcctcgggggacatgttcaacaaccgtggccggcgtccctatgcctcggtcaac
ttcgtcaccgcccacgatggtttcaccttgcgcgacctggtgtcgtacaaccacaagcac
aatgaggacaacgacgagaacaaccaggacggcaccgataacaacctgtcatggaactgc
ggtgtcgaggggccaaccgacgacccggccgtgaatgccctgcgcatgcgccagatgcgc
aactacttcgctaccctgctgctggcccagggcacgccgatgatcgtcgccggcgatgag
ttcagccgtacccagcacggcaacaacaatgcctattgccaggacagcgagatcggctgg
gtgaactgggacctggaccaggagggcaaagagctgctggctttcgtcaagcgcctcacc
cgcctgcgcctggcctacccggtactgcgccgctcgcgcttcctggttggcgactacaat
gaggcgatcggtgtcaaggatgtgacctggctggcaccggatggcaacgagatgagcgtg
gaacaatgggaagacccgcacgggcgttgcctgggcatgttgatcgatggccgtgcccag
gtcagcggcattgccaggccaggcgccgaggccacagtgctgctgatcgtcaatgcccac
catgacatcgtgccgttccagctgccaaccgtgcccgagggggattactggagttgcctg
gtcgataccgaccggccagagctgcgcaaggggcagcatctgcagttcgacagcaccttc
gaggtgaaggggcggtcgttgctgctgatggtgttgcagcgtgatgaggagtga
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