KEGG   Pseudomonas plecoglossicida: RK21_05580
Entry
RK21_05580        CDS       T03646                                 
Name
(GenBank) bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
ppj  Pseudomonas plecoglossicida
Pathway
ppj00250  Alanine, aspartate and glutamate metabolism
ppj00330  Arginine and proline metabolism
ppj01100  Metabolic pathways
ppj01110  Biosynthesis of secondary metabolites
Module
ppj_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:ppj00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    RK21_05580
   00330 Arginine and proline metabolism
    RK21_05580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ppj03000]
    RK21_05580
Enzymes [BR:ppj01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     RK21_05580
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     RK21_05580
Transcription factors [BR:ppj03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    RK21_05580
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PutA_1st PRODH RHH_1
Other DBs
NCBI-ProteinID: AJG17088
LinkDB
Position
complement(5884161..5888114)
AA seq 1317 aa
MATTTLGVKLDDPTRERLKAAAQSIDRTPHWLIKQAIFNYLEKLEGGATLTELNGHASNL
ADDAGEVQPDHSHQCFLEFAESILPQSVLRSAITAAYRRPEQEVVPMLLEQARLSAPLAE
ATNKMAAGIAEKLRNQKSAGGRAGIVQGLLQEFSLSSQEGVALMCLAEALLRIPDKGTRD
ALIRDKISTGNWQPHLGNSPSLFVNAATWGLLLTGKLVSTHNESGLTSSLTRIIGKSGEP
MIRKGVDMAMRLMGEQFVTGETIAEALANASRFESKGFRYSYDMLGEAALTEHDAQKYLA
SYEQAIHSIGKASHGRGIYEGPGISIKLSALHPRYSRAQYERVMEELYPRLLSLTLLAKQ
YDIGLNIDAEEADRLELSLDLLERLCFEPSLAGWNGIGFVIQAYQKRCPYVIDYVIDLAK
RSRHRLMIRLVKGAYWDSEIKRAQVEGLEGYPVYTRKVYTDVSYVACARKLLAVPEAIYP
QFATHNAHTLSAIYHIAGQNYYPGQYEFQCLHGMGEPLYEQVVGKISEGKLNRPCRVYAP
VGTHETLLAYLVRRLLENGANTSFVNRIADHSISIQELVADPVASIERMGTQEGSIGLPH
PRIPLPRELYGSERANSAGIDMANEHRLASLSCAMLATAHNDWKATPLLACAASEGAAAP
VLNPADHRDVVGHVQEATVADVDNAIQCALNAAPIWQATPPAERAAILERTADLMEAEIQ
PLMGLLIREAGKTFANAIAEVREAVDFLRYYAVQARNDFSNDAHRPLGPVVCISPWNFPL
AIFTGQVAAALAAGNPVLAKPAEQTPLIAAQAVRLLLEAGIPEGVLQLLPGRGETVGAGL
VGDERVKGVMFTGSTEVARLLQRNVAGRLDNQGRPIPLIAETGGQNAMIVDSSALTEQVV
IDVVSSAFDSAGQRCSALRVLCLQEDSADRVIEMLKGAMAESRLGCPDRLAVDIGPVIDA
EAKAGIEKHIQGMREKGRSVYQVAIADAAELKRGTFVMPTLIELESFDELKREIFGPVLH
VVRYNRRNLDQLIEQINNSGYGLTLGVHTRIDETIAKVVETANAGNMYVNRNIVGAVVGV
QPFGGEGLSGTGPKAGGPLYLYRLLSTRPADAIGRHFQQQDGEGKPDRALHEQLIKPLHG
LKAWAESNQLADLAALCSQFASQSQSGIARLLPGPTGERNSYTILPREHVLCLADNEADL
LAQFAAVLAVGSSAVWADGEPGKALRVRLPRELQTKVKLVADWNKDEVAFDAVIHHGDSD
QLRGVCQQVAKRAGAIVGVHGLSSGDHQIALERLVIERAVSVNTAAAGGNASLMTIG
NT seq 3954 nt   +upstreamnt  +downstreamnt
atggcgacgaccacccttggggtcaaactcgatgacccgacccgtgagcgactcaaggca
gctgcgcagtcgattgaccgcaccccgcactggttgatcaagcaagcgatcttcaactac
ctggagaagctcgagggtggtgccaccctgaccgaactcaacggccatgccagcaacctg
gccgacgacgccggtgaggtccaacctgaccacagccatcagtgcttccttgagttcgcc
gagagtatcctgccgcagtcggtattgcgctcggcgatcaccgccgcctaccgccgcccc
gaacaggaagtggtaccgatgctgctggagcaggcgcgcctgagcgccccgctggccgaa
gcgaccaacaagatggccgccggcatcgccgaaaaactgcgtaaccagaagagcgctggc
ggccgtgccggcatcgttcagggcctgctgcaggaattctcgctgtcgtcccaggaaggc
gtggcactgatgtgcctggccgaagccctgctgcgcatccccgacaagggcacccgtgat
gcgctgatccgcgacaagatcagcaccggcaactggcaaccgcacctgggcaacagcccg
tcgctgttcgtcaacgccgccacctggggcctgctgctgaccggcaagctggtatctacc
cacaatgaatccggcctcacctcctcgctcacccgcatcatcggcaagagcggcgagccg
atgattcgcaagggcgtcgacatggccatgcgcctgatgggcgagcagttcgtcaccggc
gaaaccatcgccgaagccctggccaatgccagccgcttcgagtccaagggcttccgctat
tcctacgacatgctcggcgaagccgcactgaccgagcacgacgcacagaagtacctggcg
tcctacgagcaggccatccactcgatcggcaaggcctctcatggccgtggcatctatgaa
ggcccgggcatctcgatcaagctgtcggcactgcacccgcgctacagccgcgcccagtac
gagcgcgtgatggaagagctgtacccgcgcctgctgtcgctgaccctgctggccaagcag
tacgacatcggcctgaacatcgacgccgaagaagccgaccgcctggagctgtcgctcgac
ctgctcgagcgcctgtgcttcgagccttcgctggccggctggaacggtatcggcttcgtt
atccaggcctaccagaagcgctgcccgtatgtgatcgactatgtcatcgacctggccaag
cgcagccgccaccgcctgatgatccgcctggtgaaaggcgcctactgggacagcgaaatc
aagcgcgcccaggtcgaaggcctggaaggctacccggtctacacccgcaaggtgtacacc
gacgtgtcctacgtcgcctgcgcccgcaagctgctggccgtgccagaagccatctacccg
cagttcgccacccacaacgcccacaccctgtcggccatctaccacattgccggtcagaac
tactacccgggccagtacgagttccagtgcctgcacggcatgggcgagccactgtacgag
caggtggtcggcaagatttccgaaggcaagctgaaccgtccgtgccgcgtctatgcaccg
gtcggcacccacgaaacgctgctggcctacctggtgcgtcgcctgctggaaaacggcgcc
aacacctcgttcgtcaaccgcatcgccgaccactcgatctccatccaggaactggtcgcc
gacccggtcgccagcatcgagcgcatgggcacccaggaaggcagcatcggcctgccgcac
ccacgcatcccgctgccgcgtgaattgtatggcagcgagcgggccaactcggccggcatc
gacatggccaacgaacaccgcctggcgtcgctgtcctgcgccatgctggccaccgcccac
aacgactggaaagccacgccactgctggcctgcgctgccagcgaaggcgccgccgcaccg
gtcctgaacccggcggaccaccgcgacgtggtcggccatgttcaggaagccacggtcgcc
gacgtcgacaacgccatccagtgcgcactgaatgccgctccgatctggcaggccaccccg
ccggccgaacgcgccgccattctggagcgcaccgccgacctgatggaggccgaaatccag
ccgctgatgggcctgctcatccgcgaagccggcaagaccttcgccaacgccatcgccgaa
gtgcgtgaagccgtggacttcctgcgctactacgcggtgcaggcacgcaacgacttcagc
aacgacgcccaccgcccgctgggcccggtggtatgcatcagcccgtggaacttcccgctg
gcgatcttcaccggccaggtagccgcagcgctcgccgccggcaaccccgtactggccaag
ccggccgagcaaaccccgctgatcgctgcccaggccgtgcgcctgctgctggaagccggc
attcctgaaggcgtgctgcagctgctgcctggccgcggtgaaaccgtcggtgccggcctg
gtgggtgacgagcgcgtcaagggcgtgatgttcaccggttccactgaagtggcccgcctg
ctgcagcgcaacgtcgccggccgcctggacaaccagggccgcccgatcccgctgatcgcc
gaaaccggcggccagaacgcgatgatcgtcgactcctcggcactgaccgagcaggtggtg
atcgatgtggtgtcctcggccttcgacagcgccggccagcgttgctcggcactgcgcgtg
ctgtgcctgcaggaagactccgccgaccgcgtgatcgaaatgctcaagggtgccatggcc
gaaagtcgcctgggctgcccggaccgcctggccgtggacattggcccggtgatcgacgcc
gaagccaaagccggcatcgagaagcacatccagggcatgcgcgagaaaggtcgctcggtc
taccaggtggccattgccgatgctgccgagctcaagcgcggcaccttcgtcatgccgacc
ctgatcgagctggaaagctttgacgagctcaagcgtgaaatcttcggcccggtgctgcac
gtggtgcgctacaaccgtcgcaacctggaccagctgatcgagcagatcaacaactccggc
tacggcctgaccctcggcgtgcacacccgcatcgacgagaccatcgccaaggtggtggaa
accgccaacgccggcaacatgtacgtcaaccgcaacatcgtcggtgcagtggtgggtgtg
cagccgttcggtggtgaaggcctgtccggcaccggcccgaaagccggcggcccgctgtac
ctgtaccgcctgctgtcgacccgcccggccgacgcgattggccgccacttccagcagcag
gacggcgaaggcaagcctgaccgcgccctgcacgaacagctgatcaagccgctgcacggc
ctgaaggcatgggccgagagcaaccagctggccgacctggctgcgctgtgcagccagttc
gccagccagtcgcagagcggcatcgcccgcctgttgccaggccctaccggcgagcgcaac
agctacaccatcctgccgcgtgagcacgtgctgtgcctggccgacaacgaagctgacctg
ctggcgcagtttgccgcagtgctggccgttggtagctcggcggtatgggcggacggcgag
ccgggcaaagccctgcgtgtccgcctgccgcgagagctgcagaccaaggtcaaattggtg
gcggactggaacaaggatgaagtggcgttcgatgccgtgatccaccatggcgactcggat
caactgcgcggcgtatgccagcaggtggccaagcgtgccggggcgatcgtgggtgtgcac
gggctgtccagcggcgaccaccagattgcgctggagcgcctggtgatcgaacgggcggtg
agtgtgaacactgctgctgccggtggtaatgccagcttgatgaccattggctga

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