Planococcus plakortidis: BBI15_08315
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Entry
BBI15_08315 CDS
T04812
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
ppla
Planococcus plakortidis
Pathway
ppla03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppla00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BBI15_08315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppla03021
]
BBI15_08315
03400 DNA repair and recombination proteins [BR:
ppla03400
]
BBI15_08315
Transcription machinery [BR:
ppla03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BBI15_08315
DNA repair and recombination proteins [BR:
ppla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BBI15_08315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF6604
DUF4197
Motif
Other DBs
NCBI-ProteinID:
ANU20219
UniProt:
A0A1C7E916
LinkDB
All DBs
Position
complement(2562168..2562764)
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AA seq
198 aa
AA seq
DB search
MNIRELTKEELLEESFVDLTYAILEETKETKTFSELVAELQQLIGLSEEEMKTHLAQYYT
DMNIDGRFLILGENRWGLREWYPVEQIEEESAPTVKARKKKKSKTADDDFDDLDLELEDE
LDFEDFGEDDGDVSSDDDDDDDDDDEASVKAPVVDLDYDAADDDDDVDEVEDVGVLVEDL
DGNIIDEEDDEEDEDGLK
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaacatccgtgaattaacgaaagaagaattgctagaagagtcgttcgtcgacttaaca
tatgccattttggaagaaacgaaagaaacgaaaactttttcagagcttgtcgctgaattg
cagcaattgatcggcctctccgaagaagagatgaaaacgcatcttgcccagtactatacg
gacatgaacatcgatggccgcttcctgatccttggcgaaaaccgctggggccttcgcgag
tggtacccggtagaacagattgaggaagaatctgcaccgacggtcaaagcccgcaagaaa
aagaaatcgaaaacggcagacgatgatttcgacgacttggaccttgaactcgaagatgaa
ttggacttcgaagacttcggcgaagatgatggcgacgtttcttcggatgatgacgatgac
gacgatgatgacgacgaagcgtctgtcaaagcaccggtcgttgatctggattacgatgca
gccgatgacgatgacgatgtcgacgaagtggaagatgtcggcgtgctcgtagaagacctc
gatggcaatatcatcgatgaagaagacgacgaagaagatgaggatgggctgaagtag
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