Pleuronectes platessa (European plaice): 128447323
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Entry
128447323 CDS
T09923
Symbol
spata5l1
Name
(RefSeq) spermatogenesis-associated protein 5-like protein 1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pplt03009
]
128447323 (spata5l1)
Enzymes [BR:
pplt01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
128447323 (spata5l1)
Ribosome biogenesis [BR:
pplt03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
128447323 (spata5l1)
BRITE hierarchy
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_5
RuvB_N
AAA_22
AAA_33
AAA_14
AAA_7
TIP49
Rad17
NTPase_1
NACHT
bpMoxR
RsgA_GTPase
AAA_11
Motif
Other DBs
NCBI-GeneID:
128447323
NCBI-ProteinID:
XP_053285671
EnsemblRapid:
ENSOESG00000010179
LinkDB
All DBs
Position
1:26334918..26339803
Genome browser
AA seq
747 aa
AA seq
DB search
MTSLRLLSVDPSDRGSQRCRLGPGLMSALGLSLGSPLLVSVPGGSCLCTAWPRSDLAEGF
LQMDLKCASPGLISHPPSLLHLDPDQLSPVTCPKLKGVKITVVVQTFDFKKHTPHKLIHE
LVKDMLKGVCVHEKHVINLEDVDTEIRYVVIESLHPDSASSGLITSKTGVEIIGIQTVRH
YRSQQQDHNTVSLGGLEEVSASLREMLQLPLLYPGTLNSLGVSCPRGVLLVGPSGVGKTL
LVHKVVGEVGASLVLVRGPEVVGSRPGESEERLRAVFDRARAAADEGPCVLFLDELDSLC
PRRTGSSAPENRLVAQLLTLMDGINQSDRFLIVGATNRPDSLDPALRRPGRFDREVIIGA
PTLQQRKAILCVLCARMPLCPGVDMAELAQRTSGFVGADLSALCREAAMHALRETSKGSG
EQLVRMSHFQEALRLVRPSCLRGSLGRTELPPVSLEKIGGLDEVKLKLRQSIEWPMKYPE
AFVRLGLSRPRGVLLYGPPGCAKTTLVRAAASSSHCAFLSVSGADLYSPYVGDSEKALAQ
LFRQARACAPCILFLDEIDSLIGSRSNNQSSGVHTRLLSVLLNEMDGVGLRSLERRGTEK
ILQAEGAEETRPQDQLDCQEVCNKEVMVVAATNRPDCLDSALLRPGRLDHIIYVPPPDQQ
ARLAVLKVCMQSMPVAADVCLEELASKSELYSGADLENLCKEAALLALQEENMAASVIKH
THFLQALGKMSPSLTAQQIHKYQTNFR
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccctgcggctgctgtcggtggatccatcagaccgcggctctcagagatgccgg
ctgggtccaggcctgatgtcggccctgggcctgagtctgggctcccccctgctggtgtct
gtcccgggggggagctgcctgtgcaccgcctggccccgctccgacctggcagagggcttc
ctgcagatggacctgaagtgtgcgtctcccggtctgatctctcatcctccctcactcctg
cacctggaccccgaccagctctcgcctgtgacctgccccaaactgaaaggtgtgaagata
accgtggtagtccagacgtttgactttaagaaacacactcctcacaaacttattcatgag
ctcgtgaaggacatgctgaaaggtgtgtgtgtccacgagaagcatgtgatcaacctggag
gacgttgatacagagatcagatatgttgtgattgaaagccttcacccggactcggccagt
tctggattaatcacctcgaaaaccggtgtggagataattggcatccagacagtccgccat
tacaggagtcagcagcaggaccataacactgtgtcactgggaggactggaggaggtgagt
gcttccctgagagagatgctgcagctgcctctgctttaccccggtaccctgaactcactg
ggtgtgtcctgtcccagaggcgtcctcctggtggggccttcaggggtgggcaagaccctg
ctggtccacaaggtggtgggggaggtgggggccagcctggtgctggtcagagggccagag
gtggtgggctcccggccgggtgagagcgaggagaggctgcgggctgtgttcgatcgagcc
cgagctgcagccgacgagggcccgtgtgttctgttcctagacgagctggactctctgtgt
ccgaggagaaccggctcgtcggcgccggagaaccgcctggtggctcagctcctcactctg
atggacgggatcaatcagtcggatcgcttcctcatcgttggagccactaaccggccggac
agcttggacccggctctacgccggcctggaagattcgatagagaagttatcatcggagct
cccactttgcagcagaggaaagccatcctgtgtgttctgtgtgcgaggatgcctctgtgt
cccggcgtggacatggcagagctcgcacagagaacttcaggcttcgtgggagcggacctc
agtgctctgtgccgggaggctgccatgcacgctctaagagagacctctaagggttcaggg
gagcagctggtgcgtatgagccacttccaggaggccctgaggctggtgcgtccctcctgc
ctgcgcggcagcctgggcaggacggagctccctccggtgtctttggagaagataggaggc
ctggacgaggtcaagctcaaactaagacagagtattgagtggccgatgaagtatccggag
gcctttgtgcgtctgggtctcagtcggccccgtggcgtgctgctctacggacctccagga
tgtgcaaagaccaccctggtcagagcggcagcaagctcctcccactgtgccttcctgtct
gtcagtggcgctgacctctactctccgtatgtcggagactcagaaaaggctttagcacag
ctgtttcgacaggcccgtgcctgtgccccctgtatccttttcctcgatgagatcgactct
ctgattggctctcggtcgaacaaccaatccagcggcgtgcacacacgcctcctgtctgtg
ttgctgaatgagatggatggggtcggcctgaggtcgctggagaggagagggacagagaag
atcctccaggcagagggagctgaggagacccgccctcaggaccagttggactgccaggaa
gtatgcaacaaagaggtgatggtcgtagccgccacaaacagacccgactgcttagacagc
gccctcctcaggcctggaagactggaccacatcatctacgtcccaccacccgaccagcag
gctcgactcgctgtcctgaaggtgtgtatgcagtcgatgcctgttgccgctgatgtgtgt
ctggaggaactagcgtcaaagagcgaactttactctggagctgacctggaaaacctgtgt
aaagaggctgctctgctggcgcttcaagaagagaacatggcggcttctgtcatcaaacac
actcacttcctgcaggccctcggaaagatgagcccctctctcactgcacagcagatacac
aaatatcaaacaaacttcagatga
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integrated database retrieval system
