Pleuronectes platessa (European plaice): 128448917
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Entry
128448917 CDS
T09923
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pplt03016
]
128448917 (cdkal1)
Enzymes [BR:
pplt01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
128448917 (cdkal1)
Transfer RNA biogenesis [BR:
pplt03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
128448917 (cdkal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
128448917
NCBI-ProteinID:
XP_053287752
EnsemblRapid:
ENSOESG00000020705
LinkDB
All DBs
Position
10:16025348..16262245
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AA seq
564 aa
AA seq
DB search
MPSTCDSLIDDIEDMVSSSDPTPQERLTARKSIIPRSRKRKELQSNEELHADSLIPGTQK
IWMKTWGCSHNSSDGEYMAGQLAASGYKMTDDPAEADLWLLNSCTVKNPAEDHFRNSIKK
AQEQEKKVVLAGCVPQAQPRMDYLKGLSIIGVQQIDRVVEVVDEAIKGHSVRLLGQKKDG
GRRLGGARLDLPKIRRNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVERARQS
FQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWRLVEEIPEGAMLRLGMTNPPYILEHLEEM
AKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVDDFKRVVDFLKERVPGVTIATDIICG
FPGETEEDFQETVDLVKCYKFPSLFINQFYPRPGTPAAKMEQVPAQVKKQRTKELSHLFH
SYNPYDHEVGERQHVLVTEESFDAQYWVSHNKFYEQVLVPKRDEFKGKMVEVDIYEAGKH
FLRGRPVDDSKLFTPSITAPLQKGEVSGLVQEQIPNGVQSCASISSSSTLLIGSYSLDRE
ALKKLGIGLALAAAVLAFILEKVF
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccacctgtgactctctgattgatgacatcgaagacatggtgtcctctagtgac
cccactcctcaagagagactgactgcaagaaagagcatcataccaaggtccaggaagaga
aaagagcttcagagcaacgaggagctccacgctgacagtttgatccctgggacacagaag
atctggatgaaaacatggggctgcagtcacaacagctcagatggagagtacatggctgga
cagctggctgccagtggatacaagatgactgatgacccagcagaagcagacctgtggttg
ctgaacagctgcactgtgaagaaccctgcagaggaccacttcagaaactcaatcaaaaaa
gctcaagaacaggagaaaaaggtggtactagcaggttgcgttccccaggcccagccacgt
atggactacctcaaaggactcagcatcattggggtccagcagattgatcgagtggtggaa
gtcgtggatgaggcaattaaaggccactcggttcggctgttaggtcagaagaaagacgga
ggccggaggctcggaggagcgagactggacctgcccaagatcaggaggaacccactcatt
gaaatcatctccattaacactgggtgtctgaatgcttgtacctactgcaagaccaagcat
gccagaggagacctggccagttatcccattgaggaactagtggagagagccagacagtct
ttccaggagggagtgtgtgagatctggttgaccagtgaagacacaggagcttatggtcga
gacataggaacagatctgcccacgttgctgtggagactggtggaagagatacctgaagga
gccatgctgaggctgggtatgaccaatccaccctatatcctggaacacctagaggagatg
gctaagatattgaatcatccgcgtgtctatgccttccttcatattcctgtgcagtcggcc
tcggacagcgtgctgatggacatgaagagggagtattgcgtcgacgacttcaaaagagta
gtggacttcctcaaagagagggtcccaggtgtaaccatcgctactgatataatctgcggt
tttcccggtgagacagaggaggacttccaggagacggtagacttggtgaaatgctacaaa
ttccccagtctcttcatcaaccagttctacccccgacctggtacacctgccgccaagatg
gagcaagtaccagcacaagtgaaaaagcagaggactaaagaactgtcccatctcttccac
tcctacaacccatacgaccacgaggttggagagaggcaacatgtgttggtgacagaggag
tcgtttgatgcccaatattgggtgtctcacaacaagttctatgaacaggtgctggtccct
aagagggatgagttcaaagggaagatggttgaggtggacatctacgaggcaggaaaacac
ttcctgagaggccggccagtagacgacagtaagctgttcaccccctccatcacagcgcca
ctacagaaaggagaggtgtctggcctggtgcaggaacagattcccaacggcgtccagagt
tgtgcttctatttcctcttcgtccactctgctgatcggctcctacagtctagacagggag
gctctgaagaagctggggatcggactcgctctggctgcagccgtcttggcctttatcttg
gagaaggtgttctga
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