Paenibacillus polymyxa SC2: PPSC2_23710
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Entry
PPSC2_23710 CDS
T01335
Symbol
hemD
Name
(GenBank) uroporphyrinogen-III synthase
KO
K01719
uroporphyrinogen-III synthase [EC:
4.2.1.75
]
Organism
ppm
Paenibacillus polymyxa SC2
Pathway
ppm00860
Porphyrin metabolism
ppm01100
Metabolic pathways
ppm01110
Biosynthesis of secondary metabolites
ppm01120
Microbial metabolism in diverse environments
ppm01240
Biosynthesis of cofactors
Module
ppm_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
ppm_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
ppm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PPSC2_23710 (hemD)
Enzymes [BR:
ppm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
PPSC2_23710 (hemD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HEM4
DUF2866
Motif
Other DBs
NCBI-ProteinID:
ADO58992
UniProt:
E3EAS8
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All DBs
Position
complement(5330366..5331223)
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AA seq
285 aa
AA seq
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MAQRMAGKRVALAGPRKAEEMALLVMKMGGEPVERPAQGTVFLDDIELRNAVVSWVKNPP
DWYIFTTGMGLDALFDMAEDMGVAEQIIELLQSSNIAARGYKTVNGLKKRGFTPAVRDED
GSLIGLTRAFAPYDLKGKEVLLQLHGDPAPRLVEWLDEQGAVTRQVLPYKHIPPEEAKLQ
ALLDDVINRTIDAVTFTSGPQIRFLAQYAREQNRFEDLLEAFREDVIAVSVGKVTAQSIL
EEGIERIVFPTEERMGAMMVELGKYFEHSDSVHGCGLKSVNGHLK
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacgcatggcaggtaagagagtcgctcttgccggtccccgtaaagcagaagaa
atggcactgctagttatgaagatggggggcgagccagtagagcgtccggcccaggggact
gtttttctagatgatatcgagctgcgcaacgctgttgtatcatgggtgaagaaccctccg
gactggtacatcttcacgaccggtatgggactggatgctctgttcgatatggcggaggat
atgggcgtggccgagcagattatagagctgctgcaatcctccaacattgcagcacggggc
tacaagacggtcaatggactcaaaaagcgtggctttacgccagcagtacgggacgaggac
ggaagtttgatcggattgacacgggcctttgccccatatgatctgaaggggaaggaagtg
ctgttgcaactgcatggagacccggccccccggttggtagagtggctggatgagcagggc
gcagtgacccgccaagtacttccttataagcatatcccacctgaagaagcaaaattgcag
gcgttactagatgatgttataaaccgtacgattgatgccgttacgttcacgagtggcccg
caaatccgatttttggcccaatatgccagagagcaaaatcgatttgaggatttactggaa
gcttttcgtgaagatgtaattgctgtatcggtaggcaaggtgaccgcacaatccattttg
gaagaagggattgaacgaatcgtgtttccaactgaagagcgcatgggtgcgatgatggtg
gagctgggcaaatattttgaacatagtgattcggtgcatggctgtggtctgaagagcgtg
aacggtcatttgaaatga
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