Pandoraea pnomenusa DSM 16536: LV28_08285
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Entry
LV28_08285 CDS
T03411
Symbol
rocD
Name
(GenBank) ornithine--oxo-acid aminotransferase
KO
K00819
ornithine--oxo-acid transaminase [EC:
2.6.1.13
]
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Pathway
ppnm00330
Arginine and proline metabolism
ppnm01100
Metabolic pathways
ppnm01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
LV28_08285 (rocD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppnm01007
]
LV28_08285 (rocD)
Enzymes [BR:
ppnm01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.13 ornithine aminotransferase
LV28_08285 (rocD)
Amino acid related enzymes [BR:
ppnm01007
]
Aminotransferase (transaminase)
Class III
LV28_08285 (rocD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
AIU26535
UniProt:
A0A378YJY8
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All DBs
Position
complement(1328347..1329552)
Genome browser
AA seq
401 aa
AA seq
DB search
MNEIEREQRFGAHNYAPLPVVLSHAKGVWVWDVEGNRYLDMMSAYSAVSHGHAHPRLVAA
LTAQAQRLAVVSRAFYTDRLGAFLERLCDLTTLGGALPMNTGAEAVETAIKAARRWGYSV
KRIPADKAEIVVADGNFHGRTTTVVGFSSEPSYRADFGPFAPGFVRVPFGDIDAVRAAIT
PNTCAVLFETIQGEGGIVIPPDGFLRDLRALCTERNVLMLLDEIQSGLGRTGRWFAYQHE
DVVPDGVMLGKALGGGLLPVSAFVARRDIIDLFEPGSHGSTFGGNALAATVALEALDVMA
DEDLPGRSAEMGEYLLVRLHAIHSPLVREIRGRGLWVGIEIDPALADAHNLALRLLHRRV
LAKETRSTVLRLAPPLVIERADIDLCISALKAVLAEAEANV
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaatcgaacgcgaacaacgctttggcgctcacaattacgcgccgctgcccgtc
gtgctctcgcacgccaaaggcgtctgggtctgggacgtcgagggcaatcgttatctcgac
atgatgagcgcctattccgccgtcagccacggccacgcgcacccgcgtctggtcgccgcg
ctcaccgcgcaggcgcaacggctcgccgtcgtttcccgggcgttctacacggatcggctc
ggcgccttcctcgaacgcctgtgtgacctcaccacgcttggcggcgccctgcccatgaat
accggcgccgaggccgtcgagaccgccatcaaggccgcgcgccgctggggctacagcgtc
aagcgcatccccgcggacaaggccgagatcgtcgtggccgacggcaacttccacgggcga
accaccaccgtcgtggggttctcctccgaaccctcctatcgcgccgacttcggccccttc
gcgcccggcttcgtgcgcgtgcccttcggcgatatcgacgccgtacgcgccgccatcacc
cccaacacctgcgccgtgctcttcgaaacgattcagggcgagggcggtatcgtgatcccg
ccggacggctttctgcgtgacctgcgcgcgctgtgcaccgagcgcaacgtgctcatgctc
ctcgacgaaatccagtccgggctgggacgcacagggcgctggttcgcttatcagcacgaa
gacgtggtgcccgacggcgtcatgctcggcaaggcgctcggcggcggactgctccctgtc
tcggccttcgtggcacgccgcgacatcatcgatctgttcgaacccggcagccacggttcg
acattcggcggcaacgcgctcgcggccaccgtcgcgctcgaagccctcgacgtgatggcc
gacgaagacctgcccggccgcagtgcggagatgggggagtacctgcttgtccgcctgcat
gcgatccactcgccgctcgtgcgcgaaattcgtgggcgcggactctgggtcggcatcgag
atcgatccggcactggccgacgcgcacaacctcgcactgcggctgctgcaccgccgagtg
ctcgcgaaggagacacgctcgaccgtgctgcgactcgcaccgccgctcgtcatcgagcgc
gccgacatcgatctgtgcatctccgcgctcaaggccgtactcgccgaagccgaagcgaac
gtgtga
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