Pandoraea pnomenusa RB38: DA70_10450
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Entry
DA70_10450 CDS
T03067
Symbol
garD
Name
(GenBank) galactarate dehydratase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno00053
Ascorbate and aldarate metabolism
ppno01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
DA70_10450 (garD)
Enzymes [BR:
ppno01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
DA70_10450 (garD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF
Abhydrolase_6
Motif
Other DBs
NCBI-ProteinID:
AHN74832
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Position
1278572..1280143
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AA seq
523 aa
AA seq
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MELAPLYIRVHPNDNVAIVVNDGGLGEGATFADGLTLLERVPQGHKVALRDLAEGDEVIR
YNVVIGYATKALPRGSWVNEHVIRMPTPPALDDLPMATIPAPEMPPLENFTFQGYRNADG
SVGTRNILAITTTVQCVADVVEHAVARIKRELLPKFPNVDDVVGLGHTYGCGVAIDAPDA
MVPIRTVRNIALNPNFGGEVMMVSLGCEKLQPERLMPAGTIPISSVSAPGGESGVDNGDV
VVLQDESHVGFESMIQSIMRTAEGHLTRLNRRRRETCPASDLVVGVQCGGSDAFSGLTAN
PAVGFASDLLVRAGATVMFSEVTEVRDGVGQLTGRAATPDVAAAIIREMDWYDNYLKRGG
ADRSANTTPGNKKGGLSNIVEKAMGSIVKSGSAAISGVLSPGEKARQKGLIYAATPASDF
ICGTLQVAAGINLHVFTTGRGTPYSLAEVPVIKVATRSDLARRWHDLMDIDAGTIATGAA
TIEEVGWQLFRTMLAVASGEKQTAAEKLKLHNALVLFNPAPVT
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggaattggctccgctatatatacgtgtgcatcccaatgacaacgttgcgattgttgtg
aatgacggggggctgggggaaggggcgacgttcgcggatgggttgacgcttctcgagcga
gtgccgcaggggcacaaagtcgcgttgcgggatctggccgagggtgacgaggttatccgg
tacaacgtcgtcatcggctacgcgacgaaggcattacccagaggaagctgggtcaatgag
catgtcattcgcatgccgacgcctcccgcgctggacgacctgccgatggcgacgattccc
gcgccggagatgccgccgctcgagaatttcacgttccaggggtatcggaacgccgacgga
tcggtgggtacgcgcaatatcctcgctatcacgacgacggtgcaatgcgtcgcggatgtc
gtcgagcatgccgtggcgcgtatcaagcgcgagttgctgccgaaatttccgaatgtcgac
gatgtcgtcggtcttggtcacacctatggatgtggcgtggccatcgacgcacccgacgcc
atggtgcccatccgtacggtgcgcaatattgcgctgaacccgaacttcggtggcgaggtg
atgatggtgagcctgggctgcgaaaagctgcaaccggagcgcctcatgccggcgggcacc
attcccatctcgagcgtttcggcgccgggcggcgaatctggtgtcgacaacggcgacgtg
gtcgtgttgcaggacgagtcgcatgtgggcttcgagtcgatgattcaatcgatcatgcga
acggccgaagggcacttgacgcggttgaatcgtcggcggcgggagacctgtcccgcgtcc
gatctggtcgtcggcgtgcagtgtggcggcagcgatgcgttctccggactcactgccaac
cctgcggtgggctttgcctcggatcttctggtgcgggcgggggccacggtgatgttctcg
gaagtcacggaggtgcgtgacggcgtggggcagctcacggggcgtgcggcaacgccggac
gtcgctgcggccatcatccgcgagatggattggtacgacaactatctcaagcggggtggc
gccgaccgcagcgccaacaccacgcccggtaacaagaagggcgggctctccaacatcgtg
gagaaggcgatggggtccatcgtcaagtcgggaagcgcggcgatctcaggcgtgctttcg
ccgggcgaaaaggcaaggcagaaggggttgatctacgcggcgacaccggcgagcgatttc
atttgcggcacgctgcaagttgccgcgggcatcaatctgcacgtcttcacgaccgggcga
ggcacgccgtacagtctcgccgaagtgcccgtcatcaaagtcgcgacgcgctcggacctg
gcgcgtcgttggcacgacctgatggacatcgatgccggcacgattgcgacgggtgcggcc
acgatcgaggaggtgggctggcagctcttccgaacgatgcttgccgtcgcgagtggcgag
aagcagacggcggcggaaaagttgaaactgcacaatgccctggtgcttttcaatccggcc
cctgtgacctga
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