Paenibacillus polymyxa M1: PPM_0875
Help
Entry
PPM_0875 CDS
T01968
Symbol
yvpA
Name
(GenBank) pectate lyase Flags: Precursor
KO
K19551
pectate lyase C [EC:
4.2.2.2
4.2.2.10
]
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo00040
Pentose and glucuronate interconversions
ppo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PPM_0875 (yvpA)
Enzymes [BR:
ppo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
PPM_0875 (yvpA)
4.2.2.10 pectin lyase
PPM_0875 (yvpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
CCC83812
LinkDB
All DBs
Position
1041630..1042322
Genome browser
AA seq
230 aa
AA seq
DB search
MKTNTAKVLKKGMSIALSGMLIALFVGNYSAHAAPEVVHKTILVKAGEVYDGKGKTVVAD
PDTLGDGSQKEAQKPIFKLENNATLKNVIIAAPAADGVHVYGNGTISNVTWEDVGEDALT
LKEPGTVNITGGGAYHAYDKVFQINAEGTINIKNFRADDIGKLVRQLGGSTFRVNMTLDN
SDISNVKDSILRSDGPNSKAKITNTRYHNVKQLFKGFKSSNTSESGNTKY
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaaacacagctaaagtattgaaaaagggaatgagtattgctttatccggtatg
ctgatcgcattatttgtcggcaattattctgctcatgcagctccagaggtcgttcataag
accatacttgtaaaagccggagaagtatacgatggtaaaggcaagaccgtagtggctgac
cccgataccttgggagatggaagccaaaaagaggctcaaaagcctatcttcaagcttgaa
aataatgcaacgctgaaaaatgtgatcatcgccgcgcctgctgcggatggtgtgcatgta
tatggcaatggcaccatttccaacgtaacgtgggaggatgtcggtgaagatgcattgacg
cttaaagaaccaggcacagtgaatattacaggcggtggagcataccatgcatatgataaa
gtgttccaaatcaatgccgaaggcacaattaacattaaaaattttagagccgatgatatc
ggtaagctggttcgccaacttgggggctctacttttagagtgaatatgactttggataac
tcggatatttccaacgtgaaggattcgatcctgagatccgacggtcctaacagcaaagct
aaaattacgaatactcgttatcataatgtaaaacaattgttcaaaggctttaaatctagc
aacacgagcgagtccggcaatactaaatactaa
DBGET
integrated database retrieval system
