Paenibacillus polymyxa M1: PPM_4705
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Entry
PPM_4705 CDS
T01968
Symbol
cbiD
Name
(GenBank) cobalamin biosynthesis protein CbiD
KO
K02188
cobalt-precorrin-5B (C1)-methyltransferase [EC:
2.1.1.195
]
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo00860
Porphyrin metabolism
ppo01100
Metabolic pathways
ppo01240
Biosynthesis of cofactors
Module
ppo_M00924
Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PPM_4705 (cbiD)
Enzymes [BR:
ppo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.195 cobalt-precorrin-5B (C1)-methyltransferase
PPM_4705 (cbiD)
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GFIT
Motif
Pfam:
CbiD
Sporozoite_P67
Motif
Other DBs
NCBI-ProteinID:
CCI71512
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All DBs
Position
complement(5459409..5460554)
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AA seq
381 aa
AA seq
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MEKEAASADRPKRMKSGEAPAPDKPMRSGFTTGACAAAVAKGAVQLLITGIPPKEAVISL
PAGFDHAFELIEPVLDADEASCTTIKDGGDDPDATHQARISASVSWREEPGIELDGGVGV
GRVTKPGLPVPVGEAAINPVPRRMITEAVSGVLEEHGSAKGVRVVISVPDGEEIAKKTLN
GRLGILGGISILGTRGVVVPFSTSAYKASVVQAISVAQAMNCEEIVLTTGGSSEKYAMQM
YDQLTEEAFIQMGDFVGFAVKHGKRLGMKKIILVGMPGKLSKVAQGVMMVHSKSAPVDFG
FLAEVAREAGVDESLATAVAEANTATQVADMMTEANALSFFEKLCTYGCQHCLEHAGGGI
TVEMVLVTMKGNVLGRARVGE
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggaagcggcgtccgccgacaggcccaaacggatgaaaagtggtgaagctccc
gcgccggacaagccgatgcggtcaggctttacgacgggggcttgtgcggctgcagtagcc
aaaggagcggtacaactgctcattacgggcattccgccgaaggaagcggtgatatcgctg
cccgcgggcttcgatcatgcgtttgagctgatcgagcctgtgttggacgcggacgaagct
tcctgcacgacgatcaaggacggtggcgatgacccggatgccacgcatcaggcgagaatt
agcgcctctgttagctggcgggaggagccgggtattgagctggacggcggcgtcggagta
gggcgggtaacgaagccaggtctgcctgtgcctgtcggggaagcagcgatcaatccagtg
ccgcgccggatgattacggaagccgtatctggcgtgcttgaggagcacggatcggccaaa
ggtgtccgtgtcgttatcagtgtgccggacggtgaagaaatcgccaagaagacgctgaac
ggacggcttggcattcttggtggtatttccatactaggtacacgcggtgtggttgttccg
ttttccacgtctgcttataaagccagcgtggtgcaggctatatcggttgcacaagcgatg
aactgcgaggaaattgtcctaaccacaggcggcagcagtgaaaaatatgcaatgcaaatg
tacgatcagctgacggaagaagcctttattcagatgggtgactttgtcggctttgcagtc
aagcatggaaaacgattgggaatgaaaaagattattctcgtcggtatgcccggcaagctg
tcgaaggttgctcagggcgtcatgatggttcattccaagagcgctccggtggattttgga
tttttagccgaggttgcgcgtgaggcaggtgtggacgagtcgcttgcaacggcagtagct
gaggcgaatacagctacgcaggtagcggatatgatgaccgaagcgaatgcgctgagcttt
tttgaaaagttatgtacctatgggtgtcagcattgcctggagcatgcaggtggtggaatc
accgtagaaatggtactggtaacgatgaaagggaacgtgctggggagggcgagagtcggt
gagtag
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