Pectobacterium polaris: BJK05_00395
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Entry
BJK05_00395 CDS
T05195
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
ppoa
Pectobacterium polaris
Pathway
ppoa00730
Thiamine metabolism
ppoa01100
Metabolic pathways
ppoa01240
Biosynthesis of cofactors
ppoa04122
Sulfur relay system
Module
ppoa_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
ppoa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
BJK05_00395
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
BJK05_00395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppoa03016
]
BJK05_00395
Enzymes [BR:
ppoa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
BJK05_00395
Transfer RNA biogenesis [BR:
ppoa03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
BJK05_00395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
ASY78541
LinkDB
All DBs
Position
100283..101731
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AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDHIEVRAKDENQR
GAIRDALTRIPGIHHILEVEDHSYTDVHNIFEQALALYRERLEGKTFCVRVKRRGKHEFS
SQDVERYVGGGLNQHIETARVNLTTPQVTVHLEIEQDRLLLIKGRSEGIGGYPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVKQVAHYLWNRFGSSHRVRFI
AIDFDPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNASDTLILRPLISHDKEHIIKQARELGTEDFAKTMPEYCGVISKSPTVKAVKAKI
EAEEGHFDFAILDRVVSEARNIDIREIAEQTKQDVVEVETVASFAPTDVLLDIRAPDEQD
DKPLELDQIEIKSLPFYKLGTQFGDLDQSKTYLLYCERGVMSRLQALYLREQGFSNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaagagccaatctgtgcggttg
cgctttatcaagattctaaccggaaacattcgcaacgtattaaaacactatgatgaaacg
ctggcggttgtccgtcactgggatcatatcgaagttcgtgccaaagatgaaaatcagcgt
ggagcgattcgtgatgcgctaacaagaattccgggtattcaccatattctggaagttgaa
gatcattcttataccgatgtgcataacatctttgaacaggcgctggcgttgtatcgtgag
cggttggaaggcaagacgttttgtgtgcgagtgaaacgccgcggtaagcatgaatttagc
tcacaggacgtggagcgctacgtcggcggcggtttgaaccagcatattgaaacggcgcga
gttaacctcacgacaccgcaggtcaccgtgcatctggaaatcgagcaggaccgcctgctg
ctgattaaaggtcgcagcgaagggatcggtggttacccaatcggtacgcaggaagatgtg
ttatcactgatttctggtggtttcgactctggcgtatccagctatatgttgatgcgtcgt
ggatgccgcgtgcattactgcttcttcaaccttggcggtgctgcacatgagatcggtgtg
aagcaggtagcacactatctgtggaaccgttttggtagctcgcatcgggtgcgttttatt
gctatcgacttcgatcctgtcgtgggtgaaattttggagaaggttgacgacggtcagatg
ggtgtcgtcttaaagcgcatgatggtacgtgcggcctccaaagttgctgagcgttacggt
gttcaggcgctggtgaccggtgaagcgttagggcaggtgtccagtcagacgctcaccaac
ctgcgtttgatcgataatgcctccgataccctgattttgcgtccgctgatttctcatgat
aaagagcacattatcaaacaggctcgtgagctggggacggaagatttcgccaaaacgatg
ccggaatactgtggtgtgatctctaaaagcccgacggtgaaggcagtgaaagcgaagatt
gaggccgaagaaggccactttgattttgctatcctagatcgcgtggtgagtgaagcacgg
aatattgatatccgtgagatcgccgagcagactaagcaagatgtggttgaagtcgaaacg
gtcgcgtcgtttgcgccaactgacgtgctgttggatatccgcgcgccggatgaacaggac
gataaaccgcttgaactggatcagatcgaaatcaaatccttaccgttctacaagctgggt
acgcagtttggcgatttggatcagagcaaaacctatctactttactgcgagcgtggcgtg
atgagccgcttgcaggcactgtacctgcgtgagcaaggtttcagcaatgtgaaggtatac
cgtccgtaa
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