Pectobacterium polaris: BJK05_03395
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Entry
BJK05_03395 CDS
T05195
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ppoa
Pectobacterium polaris
Brite
KEGG Orthology (KO) [BR:
ppoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppoa03009
]
BJK05_03395 (rimO)
Enzymes [BR:
ppoa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
BJK05_03395 (rimO)
Ribosome biogenesis [BR:
ppoa03009
]
Prokaryotic type
ribosomal protein modification factors
BJK05_03395 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ASY79092
LinkDB
All DBs
Position
complement(780174..781487)
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AA seq
437 aa
AA seq
DB search
MQQPRIGFVSLGCPKNLVDSERILTELRTEGYQVVPRYDDAELVIVNTCGFIDSAVQESL
EAIGEALNENGKVIVTGCLGAKENQIREVHPKVLEITGPHSYEQVLSHVHQYVPKPTHNP
FTSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLDSRPIGSVLDEAKRLVDA
GVKELLVISQDTSAYGADVKQRTGFWNGQPVKTSMVSLCEQLASLGVWVRLHYVYPYPHV
DDVIPLMAEGKILPYLDIPLQHASPKILKLMKRPGAVERTLERIKRWREICPDLTLRSTF
IVGFPGETEEDFQMLLDFLTEAKLDRVGCFKFSPVEGASANELPDQVPEEVKEERFHRFM
QLQQAISTQRLQDKIGREVLVLIDEIDEEGAIGRSMADAPEIDGAVYLNGETDVKVGDIV
KVKVEHADEYDLWGSRV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaccacgtatcggctttgtttccctcggttgcccgaaaaacctcgtcgactcc
gagaggattctgaccgaactgcgtactgaaggttatcaggtcgtcccacgttatgacgac
gctgaactggtgatcgtcaatacctgtggttttattgacagcgccgtacaagagtcgctg
gaagccatcggcgaagcgctgaatgagaacggtaaagtcatcgtaacaggctgtctgggt
gccaaagaaaaccaaatacgcgaagtgcaccccaaggttctggaaattaccggtccgcac
agctacgagcaggtgctgtcgcacgtgcatcaatacgtccctaaaccaacacacaacccg
tttaccagcctggttcccgagcagggagtcaaactcacaccgcgccattacgcctatctg
aaaatttcagaaggctgtaaccaccgctgtacgttctgcatcatcccttctatgcgtggc
gatttggacagccgtccaatcggctcggtgttggatgaagcaaaacgtctggttgatgcc
ggggtaaaagagctgctggtgatttctcaggatacctcagcgtacggcgcggatgtgaag
caacgcactggcttttggaacgggcaaccagtcaaaaccagtatggtcagcctgtgtgag
caactggcatcgctgggcgtgtgggtgcgcctgcactatgtctacccttatccgcacgta
gacgatgtgatcccattaatggccgaaggcaaaatcctgccttatctggatattccgctc
caacacgccagcccgaaaattctcaaactgatgaagcgcccgggtgcagtagaaagaacg
ctggagcgcattaagcgctggcgcgaaatctgcccggacttaacgctgcgttctaccttt
attgtcggcttccccggcgaaacggaagaagatttccagatgctgctcgacttcctgaca
gaagccaagcttgaccgcgtgggctgctttaaattcagcccggtcgaaggtgcgtcggca
aatgaattgccggatcaggtgccggaagaggtcaaagaagaacgtttccaccgcttcatg
cagcttcagcaggcaatttctacccagcgtttgcaggataaaattggccgtgaagtgctg
gtgctgatcgatgaaatcgacgaagaaggtgcaattggtcgcagcatggccgatgctcct
gaaattgacggcgcggtttacctgaacggcgaaaccgatgtgaaagtcggtgacatcgtc
aaagtaaaagttgaacacgcagacgagtacgatctgtggggtagccgagtttaa
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