Pollicipes pollicipes (gooseneck barnacle): 119104493
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Entry
119104493 CDS
T08250
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119104493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppoi03021
]
119104493
Enzymes [BR:
ppoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119104493
Transcription machinery [BR:
ppoi03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
119104493
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF3797
Motif
Other DBs
NCBI-GeneID:
119104493
NCBI-ProteinID:
XP_037084098
EnsemblRapid:
LOC119104493
LinkDB
All DBs
Position
Unknown
AA seq
1390 aa
AA seq
DB search
MVKEQYRETDSIRKISDISFCIQTPQQVQQQGLVHVVAKNLYNQDPGRTPVQHGVLDRRM
GTSSKENNCTTCGKTLADCVGHFGYVDLELPVFHIGYFGATVAILQSICKTCSSVLLPDA
EKVTFLQKVRNPNLSYLAKKAMRKKILERCKKFAKCPSCQALNGVVKKSGMLKISHDLFR
KVKKDDPMMQLYIEEFKSVFETNRELESRVSPGVPLNLSPLDVLRLFERIPESDIPLLLM
SGSLSRPTELLLTRIPVPPLCIRPSVVSDLKAGTNEDDLTMKLTEIVFLNDVISKHRESG
AKVQMIQEDWEFLQLQCALYINGEMSGIPLNMQPKKPTRGLVQRLKGKQGRFRGNLSGKR
VDFSSRTVISPDPNLRIHQVGVPVHVAKVLTFPERVTQHNLELLRTLVVNGADTHPGANF
VEQRGTGLKKFLKFGNRQRIAQELRPGDTVERHLLDGDVVLFNRQPSLHKLSIMSHQAKV
LPHRTFRFNECVCAPYNADFDGDEMNLHLPQTEEAKAEATVLMGVKNNLVTPRNGELMIG
ATQDFLTGAYLITQKDQFFDRSKACQMLATILEGKDRSVWFQLPPPAILKPVQLWTGKQL
FGLLLRPNSACPVKANLRTKGKAYTADEELCINDSYIVIWNSEHLAGALDKSVLGSGSKN
NIFYVLYRDYGSEIAADCMWRVSRITSYFLMNRGFSIGIGDVTPGTGLLKAKQLLLNEGY
RKCDDYIRQLEGGRLQCQPGCTEEETLEAVILKELSVIRDHAGKACLRELHKSNAPLIMA
LCGSKGSFINISQMIACVGQQAISGKRVPNGFEDRALPHFERHSKVPDAKGFVGNSFYSG
LTPTEFMFHTMGGREGLVDTAVKTAETGYMQRRLVKCLEDLCSQYDISVRDSVGNMVQFC
YGGDGLDPACMEGKDKPVDFERILNHVRAKSPCADEEPLDADSVLEAVSEIVQMKEYRAC
QQSFIDELRSFVESQARAVAQTRRAYPLEAAGAPPGGGVLARLHRLTVSQLVEFCEICRD
KYLRARIEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASRNI
STPIVTAQLVNDTDPEFARRVKGRIEKTLLGQVSEYLEEVYLPDDTFLLIKLDMERIRLL
KLEVDADSIRYSICTARLPTKPASVTVESDTILTVRAGAGKSSSLYYQIQSLKEHLPFVV
IKGLPSVARAVIAIDDSKGSPRYKLFVEGNNLREVMATYGVRGTASTSNNTHEVYSTLGI
EAARSTIIHEIQYTMESHGMSIDRRHVMLLADLMCSRGEVLGITRYGLAKMKESVLMLAS
FEKTSDHLFDAAYYGQKDVHHGVSECIIMGMPTSLGTGLFKLLQKTTKVSAPPQRKLLFG
SPELHAPGFS
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggaacagtaccgggagacagactccatccgtaaaatctcggacatcagcttc
tgcatccagacgccgcagcaggtgcagcagcagggcctggtgcacgtggtggccaagaac
ctgtacaaccaggaccctggccgcactcccgtgcagcatggcgtactggaccggcgcatg
ggcacgagctccaaggagaacaactgcaccacgtgcgggaagacgctggccgactgcgtg
ggccacttcggctacgtcgacctggagcttcccgtcttccacatcggctacttcggcgcc
actgtggccatcctgcagagcatatgcaagacctgctcgtctgtcttgctgccggacgcc
gagaaagtcaccttcttgcaaaaagtccgcaaccccaacctgtcgtacctcgcgaagaag
gccatgagaaagaagattctggaacggtgcaagaaattcgccaaatgtccgtcgtgccag
gcgctgaacggagtggtcaagaagtctggcatgctgaagatcagccacgacctgttccgc
aaggtcaagaaggacgaccccatgatgcagctgtatatagaggagttcaaatcagtgttc
gagacgaaccgggagctggaatcgcgcgtgtcgccgggcgtgccgctcaacctgagtcct
ctcgacgtgctgcgactcttcgagaggataccggagagcgacatcccgctgctgctcatg
tcaggctcgctgagccggcccaccgagctgctgctgacccgtatcccggtgccgccgctc
tgcatccgaccctcggtggtgtccgacctgaaggccggcacgaacgaggacgacctcacc
atgaagctgaccgagatcgtgttcctgaacgacgtcatcagcaagcaccgcgagtcgggc
gccaaggtacagatgatccaggaggactgggagttcctgcagctgcagtgcgcgctctac
atcaacggcgagatgtccggcattccgctcaacatgcagcccaagaaacccacgcgaggg
ctggtgcagcggctcaagggcaagcaaggtcgtttccgtggcaacctcagcggcaagcgc
gtggacttcagcagccgcactgtgatctcgcccgacccgaacctgcgcattcatcaggtg
ggcgtgccggtgcacgtggccaaggtgctgaccttcccggagcgggtcacccagcacaac
ctggagctgctgcggacgctggtggtcaacggggcggacacgcacccaggggccaacttc
gtcgagcagcgcggcacgggcctcaagaagttcctcaagttcggcaaccgccagcggatc
gcgcaggagctccgcccgggtgacaccgtggagcggcacctgctggacggcgacgtggtg
ctgttcaaccggcagccgtcgctgcacaagctgtcgatcatgagccaccaggccaaggtc
ctgccgcacaggaccttcaggttcaacgagtgcgtctgcgcgccctacaacgccgacttc
gacggcgatgagatgaacctccacctgccgcagaccgaggaggccaaggccgaggccacc
gttctcatgggggtcaagaacaacctggtgacgccacgtaacggagagctgatgatcggc
gccacgcaggacttcctgacgggcgcctacctcatcacgcagaaggaccagttcttcgac
cgcagcaaggcttgccagatgctggccaccatcctggaaggcaaggaccgcagcgtctgg
ttccagctgccgccgccggccattctcaagccggtccagctgtggacgggcaaacagctg
ttcggcctgctgctgcggcccaacagcgcgtgcccggtcaaggccaacctgcgcaccaag
ggcaaggcctacaccgccgacgaggagctctgcatcaacgactcctacatcgtgatctgg
aactcagagcaccttgccggggcgctggacaagtctgtgctgggcagcggctccaagaac
aacatcttctacgtgctgtaccgcgactacggctcggagatcgccgccgactgcatgtgg
agggtgtccaggatcacgtcctacttcctgatgaaccgcggcttcagcatcggcattggt
gacgtcacgcccggcacgggcctgctcaaggccaagcagctgctgctcaacgaagggtac
cgcaagtgcgacgactacatccggcagctggagggcggccggctgcagtgtcagcccggc
tgcacggaggaggagacgctcgaggccgtcatcctgaaggagctgtcggtcatccgcgac
cacgccggcaaggcctgtctgcgcgagctgcacaagtcgaacgcgccgctcatcatggcg
ctgtgcggctccaaaggctccttcatcaacatctcgcagatgatcgcctgtgtgggccag
caggccatcagcggcaagcgcgtgccgaacggcttcgaagaccgggcgctgccccacttc
gagagacactccaaggtgccggatgccaagggcttcgtcggcaatagcttctactcgggc
ctgacgcccaccgagttcatgttccacacgatgggcggccgtgagggcctggtcgacacg
gccgtgaagacggccgagaccggctacatgcagcgacgtctggtcaagtgtctggaggat
ctgtgctcccagtacgacatcagcgtgcgggactccgtgggcaacatggtccagttctgc
tacggcggcgacggcctggaccccgcctgcatggagggcaaggacaagccggtagacttc
gagcgcatcctgaaccacgtgcgcgccaagtccccgtgcgcggacgaggagccgctggac
gccgacagcgtgctggaggccgtgtcggagatcgtgcagatgaaggagtaccgggcctgc
cagcagagcttcatcgacgagctgcggtcgtttgtggagtcccaggcgcgcgccgtggcc
cagacccggcgcgcgtacccgctggaggcggccggcgcgccgcccggcgggggcgtgctg
gcgcggctccaccgcctcaccgtctcccagctggtggagttctgcgagatctgccgcgac
aaatacctgcgcgctcgcatcgagccaggcacggccgtgggcgcgctggccgctcagagc
atcggagagccgggcacgcagatgacgctcaagacgttccacttcgccggcgtcgcgtcc
atgaacatcacgctgggagtgcccaggatcaaggagatcatcaacgcctcccgcaacatc
agcaccccgatcgtgacggcgcagctggtcaacgacaccgaccccgagttcgcgcgccgc
gtgaaaggacgcatcgagaagaccctgctgggacaggtgtcggagtacctggaggaggtg
tacctgccggacgacacgttcctgctcatcaagctggatatggagcggatcaggctgctg
aaactggaggtggatgccgactccatccgctacagcatctgcacggcacggctgccgacc
aagccggcctcggtgacggtggagagcgacaccatcctgacggtgcgcgccggcgccggc
aagagctcctccctctactaccagatccagagcctgaaggagcacctgccgttcgtcgtc
atcaagggactgccgtcggtagcgcgcgccgtgatcgccatcgacgactcgaagggctcg
ccgcgctacaagctgttcgtggagggcaacaacctgcgcgaggtgatggcgacgtacggc
gtgcggggcacggccagcacctccaacaacacccacgaggtgtacagcacgctcggcatc
gaggccgccaggtcgaccatcatccacgagatccagtacacgatggagtcgcacggcatg
tccatcgaccggcggcacgtgatgctgctggccgatctgatgtgctcccgcggggaggtg
ctgggcatcacccgctacggcctcgccaagatgaaggagagcgtgctcatgctggcgtcg
tttgagaagacgtctgaccacctgttcgacgcggcctactacggccagaaggatgttcat
cacggcgtgtctgagtgcatcatcatgggcatgcccacctcgctgggtaccggcctcttc
aagctgctccagaagaccaccaaggtgtccgcgccgccgcagcgcaagctgctgttcggc
tccccggagctgcacgcgccgggcttcagctag
DBGET
integrated database retrieval system
