Pollicipes pollicipes (gooseneck barnacle): 119107114
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Entry
119107114 CDS
T08250
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119107114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppoi03019
]
119107114
Enzymes [BR:
ppoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
119107114
Messenger RNA biogenesis [BR:
ppoi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
119107114
BRITE hierarchy
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
CbiA
nSTAND3
AAA_16
AAA_24
AAA_25
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
119107114
NCBI-ProteinID:
XP_037086381
EnsemblRapid:
LOC119107114
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MGDKSGKTALEPIQEFSLESDSELRFEVLEQNKKAKVTLELTAGLAEIFGTELVKKTVYT
FRAGAKVAVFTWQGAHVRLRGPTDVAYVAKETPMVMYLNTHAALEQMRRRAEKESGRGPV
CMVAGPTDVGKSTLATLLVNYAVRAGRRPLLVDLDVGQGAISVPGTIGAMMVERVAAVEE
GFTQTSPIVYHMGHKSPGDNTACYRLLASKLAETVNSRMRANRRAGASGCIINTCGWVKG
GGYKALTHIAVAFEVDVVLVLDHERLYNELVRDMPNFVEVVFLPKSGGVSERNKMQRMEA
RDARIRSYFYGQCGELYPHSFDVKFSDVKVFKIGAPKIPESALPLGMKIEDNDTKMVPVT
PGPNLLHHLLAVSYAESVDEDLITTNMAGVVCVTAVDTETETLTLLSPQPRPLPRSVLLL
SEVQYMDTQ
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacaaaagtggaaagacagccctggaacccatccaggagttctcactggaatct
gactcagagctgagatttgaagtactggagcagaacaagaaagccaaggtcaccctggag
ctgacagctggtctggctgagatatttggcacagaattggtgaagaaaacagtctacaca
ttccgcgccggagccaaggtggccgtgttcacgtggcaaggcgcacatgttcggctacgc
ggccccactgacgtggcatatgtagcgaaggagacgccgatggtcatgtatctgaacaca
cacgcggcgctggagcagatgcggcggcgcgctgagaaggaaagtggtcgcggccccgtc
tgtatggtggccgggccgaccgacgtcggcaaatccacgcttgccacattattggtcaac
tacgcggtgcgtgccggccgccgcccacttctggtcgacttggacgtgggccagggcgcc
atctcggtgccgggcaccataggcgccatgatggtggagcgcgtggccgccgtggaggag
ggcttcacacagacctcgcccatcgtgtaccacatgggacacaagagccccggcgacaac
acagcttgctaccggctactggccagcaagctggccgagaccgtcaacagccggatgcgt
gccaaccgacgcgcgggcgccagcgggtgcatcatcaacacctgcggctgggtcaagggc
gggggatataaggcgctgacgcacatcgccgtggcgttcgaggtggatgtcgtgctcgtg
ctcgaccacgagcggctctacaatgagctggtacgtgacatgccgaacttcgtggaggtc
gtgttcctgcccaagagcggcggcgtgtcggagcgaaacaaaatgcagcggatggaagcg
cgcgacgcgcgcatccgcagctacttctacggccagtgcggcgagctctatccgcactct
ttcgatgtcaagttttccgacgtcaaggtgttcaagatcggcgcgcccaagattcccgag
tcggcactgccgttgggtatgaagatcgaggacaacgacaccaagatggttccggtaaca
ccagggccgaatctgcttcaccacctgctggccgtcagctatgcggagtcggtcgacgag
gacctcatcaccaccaacatggccggcgtagtgtgcgtgacggccgtggacacggagacc
gagacgctgacgctgctctcgccacagccgcgccccttgccgcgcagcgtgctgctcctc
tcagaggttcagtacatggacactcagtag
DBGET
integrated database retrieval system
