Pectobacterium polonicum: LW347_05795
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Entry
LW347_05795 CDS
T08488
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo00730
Thiamine metabolism
ppoo01100
Metabolic pathways
ppoo01240
Biosynthesis of cofactors
ppoo04122
Sulfur relay system
Module
ppoo_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LW347_05795 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
LW347_05795 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppoo03016
]
LW347_05795 (thiI)
Enzymes [BR:
ppoo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
LW347_05795 (thiI)
Transfer RNA biogenesis [BR:
ppoo03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
LW347_05795 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
UVO09477
LinkDB
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Position
1292786..1294234
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AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDHIEVRAKDESQR
GAIRDALTRIPGIHHILEVEDHAYTDVHNIFEQALALYREQLEGKTFCVRVKRRGKHEFS
SQDVERYVGGGLNQHIETARVNLTSPQITVNLEIEQDRLLLIKGRYEGIGGYPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVKQVAHYLWNRFGSSHRVRFI
AIDFDPVVGEILEKVDDGQMGVVLKRMMVRAASKIAERYGVQALVTGEALGQVSSQTLTT
LRLIDNASDTLILRPLISHDKEHIIKQARELGTEDFAKTMPEYCGVISKSPTVKAVKAKI
EAEEGHFDFAILDRVVSEARNIDIREIAEQTKQDVVEVETVASFAPTDILLDIRSPDEQD
DKPLQLDQIEIKSLPFYKLGTQFGDLDQSKTYLLYCERGVMSRLQALYLREQGFSNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaagagccaatctgtgcggttg
cgctttatcaagattctaaccggaaacattcgcaacgtattaaaacactatgatgaaacg
ctggcggttgtccgtcactgggatcatatcgaagttcgggccaaagacgaaagccagcgt
ggtgcgattcgtgatgcgctgacgagaattccgggtattcaccatattctggaagttgaa
gatcacgcctatactgacgtgcacaacatctttgaacaggcgttggcgctgtaccgtgaa
caactggaaggcaagacgttttgtgtgcgggtaaaacgccgcggtaagcatgaatttagc
tcacaggatgtggaacgctatgttggcggcgggctgaatcagcacattgaaacggcgcga
gtcaatctcacttctccgcagatcactgtaaatctggaaatcgagcaggatcgtctgctg
ctgattaaaggccgctatgaagggatcggcggctatccgatcggtacgcaggaagatgta
ctgtcattaatttccggtggtttcgactccggcgtatccagctatatgttgatgcgtcgc
ggatgccgtgtgcattactgcttcttcaacctcggtggtgcagcccatgagattggggtg
aaacaggtagcacactatctgtggaaccgctttggtagctcgcatcgggtgcgttttatt
gctatcgacttcgatcctgtcgtgggtgaaattctcgagaaggtcgacgacggccagatg
ggcgtcgtgctgaagcgtatgatggtgcgtgcggcctcaaaaattgctgagcgttatggc
gttcaggcgttggtgactggcgaagcgttagggcaggtgtccagccagacgctgaccacc
ctgcgtttgatcgataacgcctctgataccctgattttgcgcccgctgatttctcacgat
aaagagcacattatcaaacaggctcgtgagttggggacggaagatttcgccaaaacgatg
ccggaatactgtggtgtgatctccaaaagcccgacggtgaaggcggtaaaagcgaagatt
gaggccgaagaagggcattttgatttcgctattctggatcgtgtggtgagcgaagcgcgg
aatattgatattcgtgagatcgccgagcagaccaagcaagacgtggttgaagtcgaaacg
gttgcctcatttgcaccaaccgacatactgctggatatccgctcgccagatgagcaggac
gataagccacttcaactggatcaaatcgaaatcaaatctttaccgttctacaagctgggt
acgcagtttggcgatttggatcagagcaaaacctatctgctttactgcgagcgtggtgtg
atgagccgcttgcaggcgctgtacctgcgtgagcaaggtttcagcaatgtgaaggtatac
cgtccgtaa
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