KEGG   Pseudodesulfovibrio portus: JCM14722_12750
Entry
JCM14722_12750    CDS       T08636                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
ppor  Pseudodesulfovibrio portus
Pathway
ppor00740  Riboflavin metabolism
ppor01100  Metabolic pathways
ppor01110  Biosynthesis of secondary metabolites
ppor01240  Biosynthesis of cofactors
ppor02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ppor00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    JCM14722_12750 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    JCM14722_12750 (ribD)
Enzymes [BR:ppor01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     JCM14722_12750 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     JCM14722_12750 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD XOO_2897-deam Med15_C Bd3614-deam
Other DBs
NCBI-ProteinID: BDQ33733
LinkDB
Position
1365307..1366401
AA seq 364 aa
MRRAIELAYRGRGTTAPNPCVGAVLVRDGKIVAEGYHTRFGALHAERECLADAREKGVAP
EGLTMYVTLEPCNHQGKTPPCTEGLIEAKVGTVVVGTRDPNPVAAGGVERLRRHGINVEL
GVCEQECLDLIGDFLLWQHSHSPYNILKMAATLDGKIASARNEPEPISGPESFARVHKLR
SMVGAVVVGGNTFYADNPSLTCRMNDLPAGFIQPLAVVVTSRLPEAPAEHTLLRERSNRT
IFMTSDKAARSKQADRLRERGTSVWPLPGEPGRLNLSPGFERLHAEQDCYYTLCEGGGRF
AMSLIEQGLADEVVHFLTPRILGDNTAPSAYSGRDNVTMADTRDFRITRTERLGADIMLT
LLAK
NT seq 1095 nt   +upstreamnt  +downstreamnt
atgcgccgggccatcgagctggcctacaggggacggggcaccaccgcgcccaacccctgc
gtgggggccgtgctcgtcagggacggcaagatcgtggccgagggataccacacccggttc
ggcgcgctgcacgccgagcgcgagtgcctggccgacgccagggaaaagggcgtggccccc
gaagggctgaccatgtacgtcaccctggagccgtgcaaccaccagggcaagaccccgccc
tgtacggaagggctcattgaggccaaggtgggcacggtggtggtcgggacccgcgacccc
aacccggtggctgcggggggcgtggagcgattgcgccgacacggcatcaacgtggaactc
ggcgtctgcgaacaggaatgcctggacctcatcggcgacttcctgctctggcagcactcc
cactcgccctacaacatcctgaaaatggcggccaccctggacggcaagatagcctcggcc
cgcaacgagccggaaccgatctccggcccggaatcctttgcccgcgtccacaagctgcgc
agcatggtcggggccgtggtggtgggaggcaacaccttctacgccgacaacccgagcctg
acctgccgcatgaacgacctgcccgcaggcttcatccagcccctggcggtggtggtcacc
tcccggctgcccgaagccccggccgagcataccctgctccgcgaacggtcgaaccgaacc
atcttcatgacctcggacaaggccgcccggtcgaaacaggcggaccgcctccgcgaacgc
ggcacgtccgtctggcccctgcccggggagcccggccgcctcaacctctcgccgggcttt
gaacgcctccacgcggaacaggactgctattacacattgtgcgaaggcggcggccggttc
gccatgtccctcatcgaacaggggctggccgacgaggtggtccacttcctgaccccgcgc
atcctgggcgacaacaccgcgccctcggcctattccgggcgcgacaacgtgaccatggcc
gacacccgcgacttccggatcacccgcacggaacggctgggcgcggacatcatgctgaca
ttactggcaaaataa

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