Pseudodesulfovibrio portus: JCM14722_13240
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Entry
JCM14722_13240 CDS
T08636
Symbol
cobDQ
Name
(GenBank) adenosylcobalamin biosynthesis bifunctional protein CobDQ
KO
K02232
adenosylcobyric acid synthase [EC:
6.3.5.10
]
Organism
ppor
Pseudodesulfovibrio portus
Pathway
ppor00860
Porphyrin metabolism
ppor01100
Metabolic pathways
ppor01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ppor00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
JCM14722_13240 (cobDQ)
Enzymes [BR:
ppor01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.10 adenosylcobyric acid synthase (glutamine-hydrolysing)
JCM14722_13240 (cobDQ)
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Gene cluster
GFIT
Motif
Pfam:
GATase_3
Aminotran_1_2
CbiA
AAA_26
GATase
SNO
Motif
Other DBs
NCBI-ProteinID:
BDQ33782
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Position
complement(1410707..1413388)
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AA seq
893 aa
AA seq
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MDRQSLFAGIPDMLDEQKFAHGGNVRRMAETVGCAPEEILDFSANVNPLGPPPWLGQVVG
QALRFVDAYPDPECHDLIMAASEKYKVWPTQVVAGNGASELLFAIAGMRRHRQAIIPSPT
YVDYARACKAHGLSIVEAGMTGDFQVNFPAMGSLLRTSSLVFLCSPNNPTGTIFSPADLR
EVASMFPQSTFVVDESFAEFLPEDTDRLVRDRPSNVITVVSLTKFYAIPGIRLGLAFADP
DVILRIRRRMPAWSVNILAQRVGTRCLRDTGYAARTREQTGLLRESLAAGLRQVPGIKVF
PGVANYLLCRMDRVGQDATWLRDRLLAEHRIGIRLCGNYTGLDDNWFRVAVRDKDDNESL
IRAMEAVSGTARGPVVKRVKRTPALMIQGTSSNAGKSVLAAAFCRIFLQDGYSVAPFKAQ
NMSLNSFVTDQGGEMGRAQVTQAMACRLTPDVRMNPVLLKPGSDTGSQVIVMGRPVGNMS
VREYVEYKPRAWEAVKTAYDSLANEHDIMVIEGAGSPAEVNLKHHDIVNMAMARFAEARV
LLTGDIDRGGVFASIVGTMNLLTPLERDLVEGFVINRFRGDASLLDPAFGQMFEHTGKPV
LGTVPYIHSLGLPEEDSVSFKEGFRPEAAKFPDGECVDIVVLDLPRISNFNDIDPLYAEP
DVHVRVVTDARDVGTPDAIIIPGSKSTVGDMKALRGTGMAAVLRELAGAGNRTRIVGICG
GFQMLGETVDDPYGLESETTRVEGFGLLPVQTTLAPEKTLTRTFGVHSASGLPVHGYEIH
HGHTAPLSDDLRVALRDNAGEPLGYMRTDKRVMGTYLHGLFDSDRFRRWFIDQLRMDRGL
SPLEQIQTTFDLEDALDHLAGVVREAVDMDSVYKALGLSGCCAQASLFYKMGG
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggacaggcagtcactttttgcgggtatccccgatatgctggacgagcagaagttcgcc
catggcgggaacgtgcggcgcatggccgaaaccgtcgggtgcgcgcccgaggagattctc
gatttttcggccaacgtgaacccgctggggccgccgccgtggctggggcaggtggtgggc
caggcgcttcggttcgtggacgcctacccggacccggaatgccacgacctgatcatggcg
gcttccgaaaagtacaaggtctggcccacccaggtggtggcgggcaacggcgcgtccgag
ctcctgttcgccatcgcaggcatgcggcgccaccggcaggccatcatcccctcgcccacc
tacgtggactatgcccgggcgtgcaaggcgcacggcctgtccatcgtcgaggcgggcatg
accggggatttccaggtgaactttccggccatggggtcgctgctacgcacgtcgtccctg
gtttttttgtgcagcccgaacaaccccacgggcacgatcttttccccggccgacctgcgc
gaggtggcgtccatgtttccgcagtccaccttcgtggtggacgagtcctttgcggagttc
ctcccggaggacacggaccggctggttcgcgacaggccgtccaacgtcatcaccgtggtc
tccctgaccaagttctacgccatccccggcatccggctgggcctggcctttgccgacccg
gacgtgatcctgcgcattcgccgacgcatgcccgcctggtccgtgaacatcctggcccag
agggtgggcacgcggtgtctgcgcgacaccggttacgcggcccgcacccgcgagcagacc
gggctgttgcgcgagtcccttgccgcagggttgcggcaggtgccgggcatcaaggtcttc
cccggcgtggccaattacctgctctgccgcatggaccgcgtgggccaggacgccacctgg
ctgcgcgaccggctgctggccgagcacaggatcggcatccggctgtgcggcaactacacc
gggctggacgacaactggtttcgggttgcggtgcgcgacaaggacgacaacgagtccctg
atccgggccatggaggcggtgtccggcacggcgcgcggcccggtggtcaagcgcgtcaag
cgcacgcccgcgctcatgatccagggcaccagctccaatgcgggcaagtcggtgctggcc
gcggccttctgccgcatatttctccaggacggctactccgtggccccgttcaaggcccag
aacatgtcgctcaattccttcgtcaccgaccagggcggcgagatgggccgcgcccaggtg
acccaggccatggcctgccgcctgaccccggacgtgcgcatgaaccccgtgctgctcaag
cccggttcggacaccggctcgcaggtcatcgtcatggggcggcccgtgggcaacatgtcc
gtgcgcgagtacgtggagtacaagccgcgcgcatgggaggcggtcaagaccgcctacgac
tccctggccaacgagcacgacatcatggtcatcgagggcgcgggcagcccggccgaggtg
aacctgaagcaccacgacatcgtgaacatggccatggcccggttcgccgaggcccgggtg
ctgctcaccggcgacatcgaccggggcggcgtgttcgcctccatcgtgggcaccatgaat
ttgctcacgcccctggagcgcgacctggtggaggggttcgtcatcaatcggttccggggc
gatgcctcgctgctcgacccggccttcggccagatgttcgagcacacgggcaagccggtg
ctgggcacggtgccgtacatccactccctggggttgcccgaggaggactcggtgtccttc
aaggaggggttccggcccgaggcggccaagttcccggacggggagtgcgtggacatcgtg
gtcctggacctgccgcgcatctcgaatttcaacgacatcgacccgctctacgccgagccg
gacgtccatgtccgggtggtcaccgacgcccgcgacgtgggcacgcccgacgcgatcatc
atccccggctccaagtccacggtgggggacatgaaggccctgcgcggcacgggcatggcc
gcagtgctgcgcgaactggccggagccgggaacaggacccggatcgtgggcatctgcggc
gggttccagatgctcggagagacagtggacgacccctacggcctggaatccgagaccacc
cgggtggagggcttcggcctgctgcccgtgcagaccaccctggccccggaaaagacgctg
acccgcaccttcggcgtgcactcggcgtccggcctgcccgtccacggctatgaaatccac
cacggccacaccgcgccgctgtccgacgacctgcgggtggccctgcgtgacaacgcgggc
gagccgctcggctatatgcggacggacaaacgggtcatgggcacctatctgcacggattg
ttcgactcggaccggttccgccgctggttcatcgaccagttgcgcatggacaggggactg
tcgccgctggagcagatccagaccaccttcgacctggaggacgcgctggatcacctggcg
ggcgtggtgcgcgaagccgtggacatggactcggtctacaaggcgctcggcctttccgga
tgctgcgcccaggccagcctcttctacaagatgggcgggtga
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