Pseudodesulfovibrio portus: JCM14722_17170
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Entry
JCM14722_17170 CDS
T08636
Symbol
hsdM
Name
(GenBank) type I restriction-modification system subunit M
KO
K03427
type I restriction enzyme M protein [EC:
2.1.1.72
]
Organism
ppor
Pseudodesulfovibrio portus
Brite
KEGG Orthology (KO) [BR:
ppor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
ppor02048
]
JCM14722_17170 (hsdM)
Enzymes [BR:
ppor01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.72 site-specific DNA-methyltransferase (adenine-specific)
JCM14722_17170 (hsdM)
Prokaryotic defense system [BR:
ppor02048
]
Restriction and modification system (R-M system)
Type I R-M system
JCM14722_17170 (hsdM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N6_Mtase
HsdM_N
MTS
UPF0020
Eco57I
Methyltransf_31
MmeI_Mtase
AviRa
Beta-lactamase2
DUF4140
Motif
Other DBs
NCBI-ProteinID:
BDQ34175
LinkDB
All DBs
Position
complement(1826826..1828331)
Genome browser
AA seq
501 aa
AA seq
DB search
MTATKVNQKEINDILFKACDTFRGILNASQYKDYILAMLFVKYLSDVYRERYEELSQQFK
GDKERIGRRLARERFVMPEGCTFYDLFDQRNATNVGEVINTTFEKIEDANRAKLQGVFRN
IDYNSEANLGKTKDRNRRLKKFLEDLNDPRLDLRPSRVGNLDVIGNAYEYLIANFAAGAG
KKAGEFYTPPEVSELIAELVDPQPGERICDPACGSGSLLIKCGNRVRRTSEDFSLYGQEI
NGETWALAKMNMFLHGMDRARVEWGDTLREPKLIEDDTTMKFEVVVANPPFSLDKWGYKS
AQSDPHNRFHRGLPPKSKADYAFISHMIETTTLESGRVGVVVPHGVLFRGGAEGKIRQQL
IEENFLDAVIGLPANLFFGTGIPAAILVFKRNRPDKDVLFIDASREYADAKNQNKLRPED
VRKIVDTYQAREFVDKYAYAAGFDELKENDFNLNIPRYVDTFEEEEEVDIAKVQGEIEEL
EKELAEVRKEMAGYLEDLGVL
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccaccaaagtgaaccagaaagagatcaacgatatcctttttaaggcgtgcgac
accttccggggcatcctcaacgccagccagtacaaggattatatcctggcgatgcttttc
gtgaagtacctctcggacgtctaccgggagcgctacgaggaattgagccagcagttcaag
ggtgacaaggaacgcatcggacgccgtctggccagggagcgtttcgtcatgccggagggg
tgcaccttctatgaccttttcgaccagcgcaacgccaccaatgtgggtgaggtcatcaac
accacctttgagaagattgaagatgcgaaccgtgccaagttgcagggagtctttcgcaac
atcgattacaattccgaggcgaatctcggcaagaccaaggaccgtaaccgccgtctgaag
aagttcctggaggacctcaatgaccctcgcctggacctgcgcccgtcgcgggtgggcaac
ctggatgtcatcggcaatgcctatgaatacctcatcgccaacttcgctgccggtgcgggc
aagaaggccggggaattctacacgccgccggaggtctcggagctgatcgcggaactggtt
gatccccagccgggcgagcgcatctgcgatcctgcctgcggttcgggctcgttgctcatc
aagtgcggcaatcgggttcgccggacgtccgaggatttttccctatacggacaggagatc
aacggcgagacctgggcgcttgccaagatgaatatgtttctgcacggcatggaccgggcc
agggtcgaatggggcgacaccctgcgtgaacccaagctgatcgaggacgacaccaccatg
aagttcgaggtggtggtggccaatccgcccttctccctcgacaagtggggctacaagtcg
gcccagagcgacccccataaccgtttccaccgcggcctgccgcccaagtccaaggcggat
tacgccttcatctcgcacatgatcgagaccaccaccctggaatccgggcgggtcggcgtg
gtggtgccgcacggcgtgcttttccggggcggcgcggaaggcaagatccggcagcagctc
atcgaggagaattttctggatgccgtcatcggcctgcctgccaacctgttcttcggcacg
ggcatcccggcggccatcctggtatttaaacgcaaccggcccgataaggatgtcctgttc
atcgacgccagccgggaatacgccgatgccaagaaccagaacaagttgcgccccgaggat
gtccgcaagatcgtggacacctaccaggcccgcgagttcgtggacaaatatgcctatgcg
gccgggttcgatgaactcaaggagaatgatttcaacctgaacatcccccgctacgtggac
accttcgaggaagaggaagaagtggacatcgccaaggtgcagggcgagatcgaggaactg
gaaaaggagctggccgaagtccgcaaggaaatggccggatacctggaagatctgggagtg
ctgtaa
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