Paenibacillus polymyxa Sb3-1: RE92_05220
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Entry
RE92_05220 CDS
T03812
Name
(GenBank) cobalamin biosynthesis protein CobQ
KO
K02232
adenosylcobyric acid synthase [EC:
6.3.5.10
]
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Pathway
ppoy00860
Porphyrin metabolism
ppoy01100
Metabolic pathways
ppoy01240
Biosynthesis of cofactors
Module
ppoy_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RE92_05220
Enzymes [BR:
ppoy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.10 adenosylcobyric acid synthase (glutamine-hydrolysing)
RE92_05220
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Motif
Pfam:
GATase_3
CbiA
AAA_26
SNO
Motif
Other DBs
NCBI-ProteinID:
AJE50502
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Position
complement(1182903..1184522)
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AA seq
539 aa
AA seq
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MSTFEPSRTNPAAILMLQGTASDVGKSVVTTALCRIFLQDGYRPAPFKSQNMALNSYVTE
DGKEIGRAQGVQAEACGIEATTDMNPILIKPVKDMHSQIVVHGVPYAYMSASDYRKDFLP
QAKHTVMDALNRLRNTYDIVLMEGAGSPAEINLKDRDIVNMNLAGWADAPVLLVSDIDRG
GVFASLVGTIELLEPHEVQRIRGFIINKFRGDLSLLQPGLDWLEERTGIPVLGVLPYLPD
IRIEAEDSVVLDKKPKRSAKDKELDIAVIRYPRISNFTDTDALAAEPDVSVRYVTEAGQL
GVPDAIILPGTKDTIGDLLELRERGLEEDIREAMKTGRTQLVGICGGYQMLGTALFDPDA
VESGLPQQADGLGWLALSTTFLKEKQTVRVQGTLSNHCPLLLSAAPDLGSAAKPIIEGYE
IHMGVTEYVTEPHVSIDRTPDSTNMKTLFQIQRGEGAAFEEGWGTIDGKVWGTYLHGVFD
NDRFRRSWLDGLRQAKGLAALDSTFTVREAKEQEFDRVAEVVRAHLDMEQVYRILGMDS
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
ttgtcaactttcgaaccgtcccgcacgaacccggcagctatattgatgcttcaaggaaca
gcgtcggatgtgggcaaaagcgtagtaacgactgcgctgtgccggatctttctgcaggac
ggctatcgtcccgcaccgtttaagtcacaaaatatggcgttaaactcttatgttactgag
gacggcaaggaaattggacgtgctcagggtgtgcaggccgaagcttgtggtattgaggcg
actaccgatatgaatccaattctgattaagccggtcaaggacatgcactcacaaattgtt
gtacacggtgtaccttatgcctatatgagcgcctctgattaccgaaaggattttttgcca
caagccaagcataccgttatggatgcgctgaatcggctgcgtaatacctatgatattgtg
cttatggaaggggcgggcagcccagcagagattaatttaaaggaccgcgatattgtaaat
atgaaccttgcaggctgggcggatgctccagtattgctggtttcggatatcgaccggggc
ggtgtctttgcctctctggtagggactatcgaattgctggaaccccatgaagtacagcgt
atccgtggatttatcattaacaaattcagaggcgatttgtccctgcttcaaccgggatta
gactggttggaagaacggacaggtattcctgtactcggtgtattgccctatttaccggac
attcgtattgaagcagaggactcggtcgtactggacaagaagcctaagcggtcagcaaaa
gataaagaattagatattgcggtgatacgatatccgcgtatttccaattttacggacacg
gatgctctggctgcagagcctgacgtgagcgtacgttatgtcacagaggccggacaattg
ggcgtaccggacgctattatcttaccgggaaccaaagacaccatcggagacctgctggaa
ttgcgtgaaagagggctggaggaagacattcgagaggctatgaagacgggacgcacgcaa
ctggttggtatttgtgggggctatcagatgctgggcacagcgctatttgaccccgatgcc
gtcgaatctgggttgccgcagcaggcagatggattaggatggctagctctatccacgacc
ttcttaaaggaaaagcaaaccgtgcgtgttcaaggaaccctgtctaatcattgcccgctt
ttgctaagcgctgcacctgatttaggttctgccgccaagccaatcattgaaggttatgaa
atacatatgggtgttacggagtatgtcacggaaccacatgtatctatagacaggactcca
gactcaacgaatatgaaaacattattccagattcagcgtggggaaggggccgcctttgag
gaaggttggggcacgattgacggtaaggtatggggaacctacttgcatggtgtgtttgat
aatgaccgttttcgccggtcctggttggatggattacgacaagccaagggcttggcagct
ttagatagcacttttactgtacgtgaagccaaggaacaagagtttgaccgtgtcgcagag
gtggtacgcgctcatttagatatggagcaagtttatcgcattctggggatggattcataa
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