KEGG   Physcomitrium patens (spreading earthmoss): 112283177
Entry
112283177         CDS       T01041                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Pathway
ppp03020  RNA polymerase
ppp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    112283177
  09124 Replication and repair
   03420 Nucleotide excision repair
    112283177
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppp03021]
    112283177
   03019 Messenger RNA biogenesis [BR:ppp03019]
    112283177
   03400 DNA repair and recombination proteins [BR:ppp03400]
    112283177
Transcription machinery [BR:ppp03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     112283177
Messenger RNA biogenesis [BR:ppp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     112283177
DNA repair and recombination proteins [BR:ppp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      112283177
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 112283177
NCBI-ProteinID: XP_024377352
LinkDB
Position
6:5740925..5743728
AA seq 177 aa
MFFHIYLDRNLQLHPRHFGPHLRDKLIAKLIQDVEGTCSGRHGFVVAVTAVETIGSGLIR
DGTGFVTFPVKYQCVVFRPFKGEILESVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMAFQ
SDDVPNYKTSDGSVRIQKDSEVRLKIVGTRVDATEIFCIGTIKDDFLGLIGDPGGAT
NT seq 534 nt   +upstreamnt  +downstreamnt
atgtttttccacatctacttggaccggaatctgcagctgcaccctcgtcacttcggaccg
catctgcgcgacaagctcattgcgaagctcatccaggacgttgagggcacctgcagtgga
cgtcatggatttgtggttgcagttactgcagtagaaacaattggctcgggactcatccgt
gacggaactggattcgtaacgtttcccgtcaagtaccaatgtgtcgttttcagacccttt
aaaggcgaaatactagagagcgttgttacgatggtgaacaagatgggcttctttgctgaa
gcggggcctgttcaaatctttgtgtcaaatcacttgataccagatgacatggcgtttcaa
tcagacgatgtaccgaattataaaacttcggatggctcggtaagaatacagaaggatagt
gaagttcggcttaagattgtgggtacccgggttgacgctacagagattttctgtattggc
acaatcaaagacgactttcttggacttattggtgatcctggaggtgcgacctga

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