Physcomitrium patens (spreading earthmoss): 112283177
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Entry
112283177 CDS
T01041
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03020
RNA polymerase
ppp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
112283177
09124 Replication and repair
03420 Nucleotide excision repair
112283177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppp03021
]
112283177
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112283177
03400 DNA repair and recombination proteins [BR:
ppp03400
]
112283177
Transcription machinery [BR:
ppp03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
112283177
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112283177
DNA repair and recombination proteins [BR:
ppp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
112283177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
Motif
Other DBs
NCBI-GeneID:
112283177
NCBI-ProteinID:
XP_024377352
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All DBs
Position
6:5740925..5743728
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AA seq
177 aa
AA seq
DB search
MFFHIYLDRNLQLHPRHFGPHLRDKLIAKLIQDVEGTCSGRHGFVVAVTAVETIGSGLIR
DGTGFVTFPVKYQCVVFRPFKGEILESVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMAFQ
SDDVPNYKTSDGSVRIQKDSEVRLKIVGTRVDATEIFCIGTIKDDFLGLIGDPGGAT
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgtttttccacatctacttggaccggaatctgcagctgcaccctcgtcacttcggaccg
catctgcgcgacaagctcattgcgaagctcatccaggacgttgagggcacctgcagtgga
cgtcatggatttgtggttgcagttactgcagtagaaacaattggctcgggactcatccgt
gacggaactggattcgtaacgtttcccgtcaagtaccaatgtgtcgttttcagacccttt
aaaggcgaaatactagagagcgttgttacgatggtgaacaagatgggcttctttgctgaa
gcggggcctgttcaaatctttgtgtcaaatcacttgataccagatgacatggcgtttcaa
tcagacgatgtaccgaattataaaacttcggatggctcggtaagaatacagaaggatagt
gaagttcggcttaagattgtgggtacccgggttgacgctacagagattttctgtattggc
acaatcaaagacgactttcttggacttattggtgatcctggaggtgcgacctga
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