Physcomitrium patens (spreading earthmoss): 112290127
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Entry
112290127 CDS
T01041
Name
(RefSeq) beta-galactosidase 8-like isoform X1
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00052
Galactose metabolism
ppp00511
Other glycan degradation
ppp00531
Glycosaminoglycan degradation
ppp00600
Sphingolipid metabolism
ppp00604
Glycosphingolipid biosynthesis - ganglio series
ppp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
112290127
09103 Lipid metabolism
00600 Sphingolipid metabolism
112290127
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
112290127
00604 Glycosphingolipid biosynthesis - ganglio series
112290127
00511 Other glycan degradation
112290127
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112290127
Enzymes [BR:
ppp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
112290127
Exosome [BR:
ppp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112290127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
BetaGal_ABD2
Glyco_hydro_42
Motif
Other DBs
NCBI-GeneID:
112290127
NCBI-ProteinID:
XP_024391883
LinkDB
All DBs
Position
13:4755824..4761819
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AA seq
658 aa
AA seq
DB search
MNFKVIMGAVLLLCLWISVGAQSSSKHSFVIENNLFLKDGVPFRIIGGDLHYFRVHPLLW
EDRLLRAKALGLNAIQTYVPWNLHEPRPGLLNFNGSADLLSFLKLAQELDFLVILRIGPY
ICAEWDLGGLPAWLLELKPSVRLRSSDASYLSQVDNWWKELLPKIAPELFSAGGSVIMVQ
IENEYGSFGIDKLYLQFLQKQVRSHLGNDIIIYTTDGAVEENLSYGSLSDDGVFAAIDFP
TGWDPAAAFALQKRFNSPGMSPPFSAEFYTGWLTHWGERLAQTDAKSTAVALDDILRLNA
SVVLYMVHGGTNFGFWSGANTGAGPSDFQPDITSYDYDAPIGEAGDVTGNKYQEIRKVLS
KYVGRELPDPPPLPQRTAYGEVTMTKMGSLFDVLDVIGNPPGGVKLEWPVPMEHLRQASG
FILYRACLPSSVRPGSKISVVEVYDRAQVFVVSASKNRMFLGTLERWSSNSIMLPTAAAV
ADFRLDILVENMGRVNYGRYMGENKGISEAVFLDDDPILGWTIHTIGLESVSELGPASFT
TTGIANSNLEITKIKPTIELLSDSDPLSGPFFYEGTLNVTQPSDTFMSFNGWNKGVAFVN
GFNLGRFWPSAGPQCTLYVPSPLLRRGENKLIILELEDSRPVQTVEFKDRVDFTCGSY
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcaaagtgattatgggagcagtgcttctgctctgtttgtggatttccgtcggg
gctcaatcttcctcaaagcacagttttgtcattgaaaataatcttttcttaaaagatggg
gtcccgtttcgaatcattgggggtgacctgcactacttccgtgtacatccactgctctgg
gaagacagactactcagagcgaaagcacttggcttgaatgcaattcaaacctatgtccct
tggaaccttcatgaaccacgccctggccttctcaacttcaatggctctgcagatctattg
tcgttcttgaagctggctcaagaactagattttctggtgattctccgcattgggccttac
atctgtgcagagtgggacctcggtggtcttcccgcctggctccttgaattgaaaccttcg
gtgagattgcggtcatctgatgcatcttatctttctcaggttgacaattggtggaaggaa
ctgcttcctaagatagcccccgagttattctcagcaggcggttcggttatcatggttcag
attgaaaacgaatatggatcttttgggatcgacaaattgtacctacagttcctccaaaag
caagttaggtcacatctgggaaatgatataatcatatacacgactgacggtgcggtcgag
gagaacctaagctatggctccctatcagacgacggtgtgtttgcagcaatagacttccca
acaggctgggatccagctgcggcttttgctctgcagaagcgtttcaactccccaggaatg
tcaccaccattttctgcggagttctacacaggctggctgactcattggggagagagactg
gctcaaacggatgcaaaaagtactgcagttgctcttgatgatattttacgactcaatgct
tctgttgtactttatatggttcatggaggaacaaattttgggttttggagtggagccaac
acaggggctggaccctccgactttcaaccagatattacttcgtacgattatgatgcccca
attggagaggctggagatgtaactggtaataagtatcaagaaataaggaaagtgctaagt
aagtacgtaggtcgagaactgcccgatccccctccgcttcctcagcgaactgcatatggg
gaagtaacaatgacaaaaatggggtctctttttgatgttttggatgtcattggtaatcct
cctggcggtgtcaagttggaatggcccgtcccaatggaacatctcagacaagcctcgggg
tttattttatatcgggcgtgtcttccttccagtgtacgaccaggaagcaaaatttctgta
gtggaggtatatgacagagcacaggtatttgttgtaagcgcttccaagaataggatgttt
ctgggcacactagaacgctggtccagcaactcaataatgttgcctactgcagccgctgta
gctgattttcggcttgatatcctggttgagaatatggggcgtgttaactatggacggtat
atgggtgaaaacaagggtatttcagaggctgtattccttgatgatgatcccattcttggt
tggactatacatacgattggattagaaagtgtttcagagcttgggcccgcttccttcaca
acaactggcattgctaacagtaatttggagataaccaaaatcaagccaaccatcgaactc
ctctcggattcggatcctttaagcggtccttttttctacgaaggtacccttaatgtaaca
cagcctagtgatacattcatgagctttaatggctggaacaagggagtggcctttgtcaat
ggattcaatctcggaagattttggcctagtgcgggcccacagtgtacattgtacgtcccc
agtcctcttcttcgacgtggagaaaataaattgatcattttggaacttgaggattcccga
ccagtacagactgtggagttcaaggacagagtcgactttacttgtgggagttactag
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