Physcomitrium patens (spreading earthmoss): 112295482
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Entry
112295482 CDS
T01041
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00900
Terpenoid backbone biosynthesis
ppp01100
Metabolic pathways
ppp01110
Biosynthesis of secondary metabolites
Module
ppp_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
112295482
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ppp01006
]
112295482
Enzymes [BR:
ppp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
112295482
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
112295482
2.5.1.29 geranylgeranyl diphosphate synthase
112295482
Prenyltransferases [BR:
ppp01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
112295482
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
112295482
NCBI-ProteinID:
XP_024402925
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All DBs
Position
18:10560359..10562894
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AA seq
387 aa
AA seq
DB search
MGSAVVAQGSQCVGLIAPTTSVAHVSSANSIKRAGRTLLRTQLYGMRSGAFGVVGRVRFS
FRISTSTSVLRIRARVINDVEEKSLETIADNLKFDFNVYMKSKAQAVNVALDKAVPMQYP
EKIREAMRYSLLAGGKRVRPALCIAACELVGGNEEMSMPAACAMEMVHTMSLIHDDLPCM
DNDDLRRGKPTNHKVFGEDTAVLAGDALLTYAFEHIARDTTGVPADRVLRVIAHLGKAVG
SEGLVAGQIVDIASEGDPTVGLETLEYVHTHKTAVLLESSVVCGAILGGASEDEISRLSK
YARNVGLLFQVVDDILDVTKSSAELGKTAGKDLLADKATYPKLLGLEKSKAFAEELTRKA
KDQLSVFDQQKAAPLLGLADYIAYRQN
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggggtcagcggtggtcgcccagggctctcagtgtgtaggtttgatagcaccgacgacg
agtgttgcgcatgtaagcagtgcgaattcgatcaaaagggctgggcggacgctacttcgc
acccaattgtatggtatgcggtccggggctttcggcgtcgtgggccgggtgcggttctcg
ttcaggatttccacctcaacctcggtgttacgcattagggcccgtgtcattaacgacgtt
gaggagaaatccttggagaccattgcggataatttgaagtttgatttcaatgtgtacatg
aaatccaaagctcaggctgtcaatgtggccctcgacaaggcggtgccaatgcaatacccg
gagaagattcgagaggccatgcggtattccttgttagctggggggaagagagtacgaccc
gccctgtgcattgcggcgtgtgagcttgtgggaggaaatgaggaaatgtcaatgccagcc
gcttgtgctatggagatggttcacaccatgtccctcattcatgacgaccttccttgcatg
gataacgacgatttacggagaggaaaacccacgaatcacaaggtatttggagaggataca
gctgtgcttgctggagacgcgctgttgacgtacgccttcgaacacattgcacgcgataca
acaggagtgcctgcggatagagttttgagagtcattgctcatctggggaaagccgtgggt
tctgagggtttggtagccgggcagattgtggacattgcatccgagggagacccaactgtc
ggcttggaaacccttgagtatgttcacacacacaagactgccgttcttctggagtcctcc
gttgtttgcggagccatccttggtggagcttctgaggacgaaatcagcagactgagcaag
tatgctcgcaatgtgggactactatttcaagtcgtggacgacatcctcgatgtcaccaag
tcgtcggccgagctagggaagactgctggcaaagatcttttggctgacaaagccacgtat
ccaaagctgttggggctagagaaatcgaaagcgttcgcggaggagttgacacggaaagcc
aaggatcaactctccgtgtttgaccaacaaaaggcagcacccttacttgggctcgcagat
tacatcgcttacaggcagaactag
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