Paenibacillus polymyxa SQR-21: PPSQR21_002340
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Entry
PPSQR21_002340 CDS
T03178
Symbol
lacZ
Name
(GenBank) family 2 glycoside hydrolase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq00052
Galactose metabolism
ppq00511
Other glycan degradation
ppq00600
Sphingolipid metabolism
ppq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
PPSQR21_002340 (lacZ)
09103 Lipid metabolism
00600 Sphingolipid metabolism
PPSQR21_002340 (lacZ)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
PPSQR21_002340 (lacZ)
Enzymes [BR:
ppq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
PPSQR21_002340 (lacZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
BetaGal_ABD2
DUF1287
Motif
Other DBs
NCBI-ProteinID:
AHM63945
LinkDB
All DBs
Position
complement(272842..275886)
Genome browser
AA seq
1014 aa
AA seq
DB search
MTLHTPSLDWLTDVTKFAVNRLPAYSDHKYYATLQEAEHQADMAWRHSLNGSWKFNYATN
PATRPAEFYAPDFEYSGWSDIQVPGHIQTQGFGQMQYANTMYPWDGHSDVRPPHIPEDHN
PVGSYIKSFVLPENMASDAQPVFISFQGVESAFYVWLNGQFVGYSEDSFTPSDFELTPYL
QAGENKLAVEVYQRSTGAWLEDQDFWRFSGIFRDVYLYTIPTVHVRDLHAKADLDATYTQ
GLLELKLTLEQSATAHTTVDVKDATGHIVASLKADFTEGTASLSATLEQVERWSAEKPYL
YTLFIQIYDADGTLVEVIPQKVGFRKFEMVNKVMHLNGKRIVFKGVNRHEFNARTGRAIS
REDMLWDIRTLKQNNMNAVRTSHYPNQTLWYELCDEYGVYVIDEMNLETHGSWQKLGAVE
PSWNIPANLPEWQGIVMDRAISMLERDKNHASILIWSCGNESYAGEVLRNVANYFRSTDP
SRLVHYEGVFHNRTYDDTSDMESRMYAKPADIEQYLNDNPQKPYISCEYMHAMGNSVGGM
HKYTELENKYELYQGGFIWDYIDQAVMKKDRYGREYLAIGGDFDDRPTDYGFCTDGIVYA
DRKVSPKMQEVKFLYQNLKLIPDTQGVTIRNENLFEGTGDYELVYSLLHEGQEITRNVSH
VDVAAQTEAYIPLTFPSTDGKPGEYVIHTALVLKEATIWAEAGHEVAFGQHIFIVENPNP
LKAPTGGALRVVHGDVNIGVHGTDFSIMFSKGAGSLTSLRYAGREMIATPPAPLFWRATT
DNDRGTALGFEAGGWFAASLTRKCVGIEVTEEQADRVTITFRYTLSIHADVQVTVAYTVL
ADGSLNVKSTYEGVSGLPNLPIFALSFKVPADYRHLDWYAMGPEENYIDRAFGARLGVFR
NEAADNVSGYVVPQESGNRTGVRRVDITDDSQRGIRITAPATAPVECNISPYTAFELESA
YHVYELPNVYYTVVTVAGKQMGVGGDDSWGAPVHEEYQIPADQKLEFEFTVQRI
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
ttgacccttcatacccctagtctggactggctcaccgatgtgaccaaattcgcggtaaat
cgcttgcctgcctattccgatcataaatattacgccacgcttcaggaagcagagcaccag
gccgatatggcctggcgtcacagcctgaatgggagttggaagttcaactatgcgacgaat
ccagccactcgcccagcagaattttatgcccctgactttgagtatagcggctggagcgat
attcaggtgccgggtcatattcagacgcaaggcttcggccaaatgcagtacgccaatacg
atgtacccgtgggacggacattcggatgttcgcccacctcatattccagaagaccacaac
ccggtcggtagctatatcaaaagctttgttttgcctgaaaatatggcttctgacgcgcaa
cctgtgttcatttcttttcaaggtgttgagtcggctttctatgtatggctgaacggacaa
tttgtcggttacagcgaggacagctttacaccgtctgattttgaactgacaccctacctg
caagctggcgaaaacaagctggcggtagaggtatatcaaagaagtacgggagcttggctg
gaggatcaggatttttggcgtttttccggcattttcagagacgtatatttgtacacgatc
cctactgttcacgtacgcgacctgcatgccaaggcggacctggatgctacctacacacag
ggcctgctggaattgaaactgactttggagcaatcagcaacagcccatacaactgtcgat
gtgaaggatgccaccggacatatagtagcttctttgaaagctgactttacagagggcacc
gcttcgctgtcagcaactttggagcaagtagagcgctggagcgcggaaaagccttatttg
tacacgttgttcattcaaatttatgatgccgatggaacactcgtcgaggtgatcccacaa
aaggttggtttccgtaaattcgagatggtgaacaaggtcatgcatctgaatggcaagcgc
attgtgttcaagggcgtgaaccgtcatgaatttaacgctcgtaccgggcgtgcaatttcc
cgtgaagatatgctgtgggatattcggacgctcaagcagaacaatatgaacgctgtacgt
acctctcattatccgaatcagacactgtggtatgaactgtgcgatgagtacggggtatac
gtgattgacgaaatgaacctggaaacacacggttcctggcaaaaactcggcgcagtcgag
ccttcgtggaatattccggccaatctgcctgagtggcagggtatcgttatggatcgcgcc
atttccatgctggaacgagacaaaaaccatgcatccattctgatctggtcctgcggaaat
gagtcgtatgcaggcgaagtgctgcgcaatgtcgctaactatttccggtccaccgacccg
agccgtctggtacactacgaaggcgtgtttcacaatcgtacgtacgatgataccagcgat
atggagagccggatgtacgccaagcccgctgatatcgagcaatacctgaacgacaatcca
caaaagccgtatatcagttgcgaatacatgcatgcgatgggcaattccgtgggcggcatg
cacaagtataccgagttggagaacaaatacgagttgtatcaaggcggttttatttgggat
tacatcgaccaggcggtcatgaaaaaagatcgctacggacgcgagtacctcgcgatcggc
ggcgactttgacgaccgtccaacagactatggcttctgtacggacggaattgtctatgcg
gaccggaaggtttcaccaaagatgcaggaggtcaaattcctgtatcaaaatctgaagctc
atcccggatacccaaggtgtgaccattcgcaacgaaaacctgttcgagggaacaggggac
tatgagctggtatacagcctgttgcatgaaggccaagagatcacgcgaaatgtgagtcat
gtggatgtggcggctcagaccgaagcctatattccattgacgttcccaagcacagacggg
aagcctggggaatatgtcattcacacggcgcttgtattgaaggaagcgacgatttgggct
gaggctgggcatgaagtagccttcggacagcatattttcattgtggaaaatccaaatccg
ctgaaagctcctactggtggagccctacgagtggtgcatggcgatgtaaatattggcgtt
cacggtacagatttcagcatcatgttctccaaaggagcaggcagcctgacttcacttcgc
tacgcgggacgtgagatgatcgctacgcctcctgccccgttattctggcgggcgaccaca
gacaatgatcggggaaccgcactcggttttgaagctggtggctggttcgctgcaagtctg
acgcgtaaatgtgtgggtatcgaggtcacggaagagcaggcagaccgtgtgaccattacg
ttccgctacacgctgagcattcatgcagacgtacaggtaacggtagcctataccgtcttg
gcggatggcagtctgaacgtaaaatcgacctatgaaggtgtatcgggactgcctaacctg
ccgatctttgccctttcgttcaaggttccagcggactaccgccatctggactggtatgcg
atgggaccagaggagaattacatcgaccgggccttcggtgctagacttggcgtattccgc
aacgaagctgcggataacgtgtccgggtatgtcgtgccacaggaatccggcaatcgtaca
ggcgtgcgccgtgtcgatattactgacgattcccagcggggcatccgcattaccgcacct
gccaccgcgccggtggaatgcaatatttcgccgtatacagcgttcgagctagaaagtgca
taccatgtgtatgagttaccgaacgtgtattacaccgttgtcaccgtagctggcaagcaa
atgggcgtaggcggcgacgacagctggggtgctccagtacatgaggaatatcaaatccca
gccgatcaaaagctggaattcgagttcaccgtgcagcggatataa
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