Paenibacillus polymyxa SQR-21: PPSQR21_047870
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Entry
PPSQR21_047870 CDS
T03178
Symbol
cobB
Name
(GenBank) cobyrinate a,c-diamide synthase / hydrogenobyrinic acid a,c-diamide synthase
KO
K02224
cobyrinic acid a,c-diamide synthase [EC:
6.3.5.9
6.3.5.11
]
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq00860
Porphyrin metabolism
ppq01100
Metabolic pathways
ppq01240
Biosynthesis of cofactors
Module
ppq_M00924
Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PPSQR21_047870 (cobB)
Enzymes [BR:
ppq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.9 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing)
PPSQR21_047870 (cobB)
6.3.5.11 cobyrinate a,c-diamide synthase
PPSQR21_047870 (cobB)
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GFIT
Motif
Pfam:
GATase_3
CbiA
AAA_26
DUF1611
AAA_30
NTPase_1
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AHM68371
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Position
complement(5417063..5418517)
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AA seq
484 aa
AA seq
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MTDDMKQAIQPDSSATARRSRIVVAGTGSGAGKTTVTLGLMKAFADSGLRVQGFKCGPDY
IDPTYHTAATGTPSRNLDSWMTSPDTVRETFIRASEGADISVIEGVMGLYDGKDPLSNIG
STAEIAMLTDSPVLLVVDVRSMARSAAAIVLGFQRLEPKLRIVGVIVNRCGSQGHYGIVK
KAIEQECGIPVLGWLKRDDGLDIPERHLGLVPAVERGELEPLFRRAAELIRAGTDLDALR
ALADSAPPLTLPEHPLFPPDQPPTAGHEVETGERPIIAVARDAAFNFYYPENMDLLRLAG
AEIVYFSPLAGECVPEHANGLYLGGGFPEEFAADIAANTGFLQDIRTAVSRDMPVFAECG
GYMVLARTLTDRAGHAYRMAGVIPSDVRMQEKRTALGYREATALQDCLLLEAGETIRGHE
FHYSVMSYDESAAPYPFAYQTKGMRGLQSEGYAKGNLLAAYTHIHLASLPKAAARWVEKC
RAYD
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgatatgaagcaggctatacagccagactcgtctgccacggcacgcagaagt
cgtatcgttgtcgccggtacgggcagcggcgcgggcaaaacgactgtgactctcgggctg
atgaaggcgttcgccgacagcggcctgcgagtgcaggggtttaagtgcggtccggattat
attgatccgacctatcatacggccgcgaccggaacgccttcccgtaatctcgattcctgg
atgacctcgccggatacggtgcgtgaaacctttatccgcgcatccgaaggcgcagatatc
tccgtgattgaaggcgtcatggggctatatgacggcaaggacccgctgagcaatattggc
tcgaccgccgaaattgccatgctgacggatagcccggtattgctggtcgtcgacgtgcgc
agcatggcacgcagcgcggccgctattgtgctcggctttcagcgcttggagcccaagctg
cgcattgtaggcgtaatcgtgaatcgctgcggtagccaggggcattacggcattgtcaaa
aaggcgatcgagcaggaatgcggcattcctgtgctcggctggttaaagcgcgatgacggg
ctggatatccccgagcgccatctgggcctggtgcctgctgtagaacgcggcgagttggag
ccgctcttcagacgggcggcagagctgattcgcgcgggtacggatctggatgcactgcgg
gcattggcggattcggctccgccgctcaccctgcccgagcacccattatttcctccagat
cagcctcccacagcaggacatgaagtcgagactggggaacgtcccatcattgctgtcgcc
agagatgcggcgttcaatttctactaccccgaaaatatggatttgctgcgccttgcggga
gcagagattgtctattttagtccgctggcgggagaatgcgtccctgagcacgccaacggc
ctatatctgggcggcggctttcccgaggagtttgcggcagatatcgctgccaatacgggc
tttctgcaagatatccgcaccgccgtgagccgggatatgcctgtattcgccgagtgcggt
ggttatatggtactggcccggacacttacggatcgggcgggtcacgcctatcgcatggcc
ggggtgatcccttcggatgttcgcatgcaggagaagcggactgcattgggataccgggaa
gcaaccgcattgcaagattgcttgctgctggaggctggagagacgattcggggacatgaa
tttcattattcggtcatgagctatgatgaatctgccgccccctatccctttgcctatcaa
accaaggggatgcgcggactccagagtgaaggttatgccaaagggaacctcttggcagcc
tacacacacattcatctcgcttctctacccaaggcagcagcacgctgggttgaaaaatgc
cgagcttacgactaa
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