Pseudodesulfovibrio profundus: DPRO_3406
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Entry
DPRO_3406 CDS
T05258
Symbol
nifD
Name
(GenBank) Nitrogenase molybdenum-iron protein alpha chain
KO
K02586
nitrogenase molybdenum-iron protein alpha chain [EC:
1.18.6.1
]
Organism
pprf
Pseudodesulfovibrio profundus
Pathway
pprf00625
Chloroalkane and chloroalkene degradation
pprf00910
Nitrogen metabolism
pprf01100
Metabolic pathways
pprf01120
Microbial metabolism in diverse environments
Module
pprf_M00175
Nitrogen fixation, nitrogen => ammonia
Brite
KEGG Orthology (KO) [BR:
pprf00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
DPRO_3406 (nifD)
09111 Xenobiotics biodegradation and metabolism
00625 Chloroalkane and chloroalkene degradation
DPRO_3406 (nifD)
Enzymes [BR:
pprf01000
]
1. Oxidoreductases
1.18 Acting on iron-sulfur proteins as donors
1.18.6 With dinitrogen as acceptor
1.18.6.1 nitrogenase
DPRO_3406 (nifD)
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Motif
Pfam:
Oxidored_nitro
CdiA_C_tRNase
Motif
Other DBs
NCBI-ProteinID:
SOB60320
UniProt:
A0A2C8FCF8
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All DBs
Position
DPRO:3540458..3542095
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AA seq
545 aa
AA seq
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MAKTKKVVQLMPTDIKEELLAKYPPKVARKRAKQIMINEATESEAPSEILANVRTIPGII
TMRGCTYAGCKGVIMGPTRDIVNITHGPIGCAFYSWLTRRNQTDAGEDGENYMTYCFSTD
MQDQDIIFGGEKKLEASIQEAYDLFHPKGICIFATCPVGLIGDDIHAVAKKMKAKFGDCN
VFAFSCEGYKGVSQSAGHHIANNQVFTHLVGENEEPKEGEYKINLLGEYNIGGDGFEIDR
ILKKCGITNIATFSGNSTYDQFASAQYADLSAVMCHRSINYVADMLETKYGIPWIKVNFI
GAKSTAKSLRKIAEYFGDKKLIDKVEAVIAEEMMEVDKVATDVRTRTDGKTAMLFVGGSR
AHHYQDLFAEMGMKTLSAGYEFAHRDDYEGREVIPDLKVDADSRNIEEITVEADPELYNP
RKTPEELKALEEAGYQFKHYAGMNPDMDKGTLIIDDLNQYEAEKLVEIMKPDIFCAGIKE
KYSIQKTGVPMKQLHSYDSGGPYAGFQGAVNFYKEIDRLVGSKVWSYMKAPWQENPELTG
TFVWE
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggccaagacgaaaaaggttgtgcagctcatgcccaccgacatcaaagaggaactcctt
gcgaagtatcctcccaaggtggcccggaagcgcgcaaaacagataatgatcaatgaagcc
acggaaagcgaggctccgtcagagatcctggcgaacgtccgcaccatccccggcatcatc
accatgcgcggttgcacctacgcaggctgcaagggcgtcatcatggggcccacccgcgat
atcgtgaatatcacccacggtcccatcggctgcgccttctactcgtggctgacccgccgt
aaccagaccgatgccggtgaagatggcgagaactacatgacctactgtttctcaacagac
atgcaggatcaggacatcatcttcggtggtgagaagaagctcgaagcatcgattcaggaa
gcctatgacctgttccaccccaagggaatatgcattttcgccacctgtcctgtcggactc
atcggtgatgacatccacgccgttgccaaaaagatgaaagccaagttcggcgattgcaac
gtcttcgccttctcatgtgaaggatacaagggcgtgtcccagtctgccggtcaccacatc
gccaacaaccaggtcttcacacacctcgtgggcgaaaacgaggaacccaaagagggcgaa
tacaagatcaacctgctcggcgaatacaacatcggcggtgacgggttcgagattgatcgt
attctcaagaagtgcggcatcaccaatatcgccaccttctcgggcaactcgacctacgac
cagttcgcttcggcccagtatgccgacctgagcgccgtcatgtgtcaccggtccatcaac
tacgtggccgatatgctggagaccaaatacggcatcccgtggatcaaggtgaacttcatc
ggtgccaagtccacggccaagtccctgcgcaagatcgctgaatacttcggcgacaagaag
ctcatcgacaaggtcgaggcagtgatcgccgaggaaatgatggaagtggacaaggtcgcc
accgacgtccgcacccggaccgacggcaagaccgccatgctcttcgtgggtggctcccgt
gcgcaccactatcaggatctctttgccgagatgggcatgaaaaccctgtccgccggttac
gagttcgctcaccgtgacgactacgaaggccgtgaagtcattcctgatctgaaggtcgac
gccgactcccgcaacatcgaagagatcaccgtcgaagctgacccggaactctacaacccg
cgcaagacgcccgaagaactcaaggcgctggaagaggctggctatcagttcaagcactac
gccggaatgaaccccgacatggacaagggaaccctgatcatcgacgacctcaaccagtac
gaagccgaaaagctggtggaaatcatgaagcccgacatcttctgcgcgggcatcaaggaa
aaatactccatccagaagaccggtgtgcccatgaagcagctgcatagctacgactccggc
ggtccctatgccggattccagggcgccgtcaatttctacaaggaaatcgaccgcctcgtc
ggaagcaaggtctggagctacatgaaagctccctggcaggagaacccggaactcacaggc
acctttgtctgggaatag
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