Pseudomonas promysalinigenes: HU725_017265
Help
Entry
HU725_017265 CDS
T07662
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pprg
Pseudomonas promysalinigenes
Brite
KEGG Orthology (KO) [BR:
pprg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pprg03009
]
HU725_017265 (rimO)
Enzymes [BR:
pprg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HU725_017265 (rimO)
Ribosome biogenesis [BR:
pprg03009
]
Prokaryotic type
ribosomal protein modification factors
HU725_017265 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QXI32752
LinkDB
All DBs
Position
3808722..3810053
Genome browser
AA seq
443 aa
AA seq
DB search
MSTTPATPKVGFVSLGCPKALVDSERILTQLRMEGYEVVPTYEDADVVVVNTCGFIDSAK
AESLEVIGEAIKENGKVIVTGCMGVEEGSIRDVHPSVLSVTGPQQYEQVVSAVHEVVPPR
QDHNPLIDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGEVLSEAE
RLVKAGVKEILVISQDTSAYGVDVKYKTDFWNGRPVKTRMLELCEALSSLGAWVRLHYVY
PYPNVDDVIPLMAAGKILPYLDIPFQHASPKVLKSMKRPAFEDRTLARIKNWREQCPELV
IRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLGLEEVPDEVKQE
RWDRFMAHQQAISAARLQLRIGKEIEVLIDEVEEQGSVGRSFFDAPEIDGSVFIDGDHGF
KPGDKVRCRVVDADEYDMWAEPV
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccactcccgccacccccaaggttggtttcgtcagcctgggctgccccaaggcc
ctggtcgattccgagcgcatcctgacccagctgcgcatggaaggctatgaagtcgtacct
acctatgaggacgccgatgtagtggtggtcaacacttgcggcttcatcgacagcgccaag
gccgagtcccttgaagtgatcggtgaagcgatcaaggagaacggcaaggtcatcgtcacc
ggttgcatgggtgtcgaagagggcagtatccgtgatgtgcacccaagcgtgctgtcggtg
actggcccgcaacagtacgagcaggtggtcagcgccgtgcacgaagtcgtgccgccacgc
caggaccacaacccgctgatcgacctggtgccgccccaaggtgtcaagctgaccccgcgc
cactacgcctacctgaagatttccgaaggctgcaatcacagctgcagcttctgcatcatc
ccgtcgatgcgtggcaagctggtcagccgtccggttggcgaggtgttgagcgaggcggaa
cgcctggtcaaggccggcgtcaaggagatcctggtaatttcccaggacaccagcgcctac
ggcgtggacgtcaagtacaagactgacttctggaacggtcggccggtcaagacccgtatg
ctcgaactgtgcgaagcgctgagcagcctgggcgcctgggtgcgtttgcactatgtgtac
ccatacccgaacgtcgacgacgtaatcccactgatggccgccggcaagatcctgccgtac
ctagacatcccgttccagcatgccagccccaaggtgctcaagtcgatgaagcgcccggcc
ttcgaagaccggaccctggcccgcatcaagaactggcgcgagcaatgccctgagctggtg
atccgctcgacattcatcgtcggcttcccgggcgagaccgaagaagacttccaatacctg
ctggactggcttaccgaagcgcagctcgatcgtgtgggctgcttccagtactcgcccgtc
gaaggcgccccggccaatgacttgggccttgaagaagtaccggatgaggtcaagcaggag
cgttgggaccgtttcatggcccaccagcaggccatcagtgctgcccgcctgcaactgcgc
atcggcaaggaaatcgaagtgctgatcgacgaagtcgaagagcaggggtcggtcggccgc
agtttcttcgacgcacctgagatcgatggcagtgtgttcatcgacggtgaccacggcttc
aagcctggcgacaaagtccgttgccgtgtggtggatgcagatgagtacgacatgtgggcc
gagccggtttaa
DBGET
integrated database retrieval system
