Poeciliopsis prolifica (blackstripe livebearer): 129367538
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Entry
129367538 CDS
T09758
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pprl03016
]
129367538 (cdkal1)
Enzymes [BR:
pprl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
129367538 (cdkal1)
Transfer RNA biogenesis [BR:
pprl03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
129367538 (cdkal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TraT
Glyco_hydro_120_ins
Motif
Other DBs
NCBI-GeneID:
129367538
NCBI-ProteinID:
XP_054898042
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MPSACDSLIEDIEDMVSFNDPTPHDRQSARKSILPRSRKKKELLSNEELQVDSLIPGTQK
IWMKTWGCSHNNSDGEYMAGQLAASGYKITEDPAEADLWLLNSCTVKNPAEDHFRNSIKK
AQEQQKKVVVAGCVPQAQPRMDYLKGLSIIGVQQIDRVVEVVDEAVKGHSVRLLGQKKDG
GRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGELASYPIEELVERARQS
FQEGVCEIWLTSEDTGAYGKDIGTDLPTLLWRLVQEIPDGAMLRLGMTNPPYILEHLEEM
AKILNHPRVYAFLHVPVQSASDSVLMDMKREYCIDDFRRVVDFLKDKVPGVTIATDIICG
FPGETEEDFEDTLKLVKHYHFPSLFINQFYPRPGTPAAKMEQVPAHVKKQRTKQLSELFH
SYNPYDHKVGERQFVLVTEESFDAQYYVSHNKFYEQVLVPKRADFKGKMIEVDIYEAGKH
FMKGRPVEDSKPFTPSIAVPLQKGEVSGLLQEHMANGVKGAASVPPDSALRVGLYSLDRE
LLKKLGICIGLAAAVLAFIIEKFY
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgccatctgcctgtgactctctgattgaagacattgaggatatggtgtcttttaatgac
cccactcctcatgacagacagtctgcaagaaagagtattctgccaaggtcaagaaagaag
aaagagcttttgagcaacgaagagcttcaagtagacagtttgatccctggcactcaaaag
atctggatgaaaacatggggatgcagtcataacaactcagatggggagtacatggctgga
cagctcgctgctagcggatacaagataacagaggacccagcagaagcagacttgtggttg
ctgaacagttgcacagtgaaaaaccctgcagaggaccacttcagaaattcaatcaagaaa
gcccaggagcagcagaagaaagtggtcgttgcaggttgtgttcctcaggctcagccccgg
atggactaccttaaaggtcttagcattattggggtccaacagattgatcgagtggtggaa
gtagtggacgaggctgttaaaggtcactctgttcgcctgctgggtcagaagaaagatggt
ggaaggagacttggaggtgcgagattggacttgccgaagattagaaagaaccctctgatt
gaaatcatctccattaacactgggtgtttgaatgcatgtacgtactgcaagacaaaacat
gctcgaggagaattggccagctatcccatagaggagcttgtggaacgagctaggcagtct
ttccaggagggagtgtgtgagatctggttgacaagtgaagacactggtgcttacggcaaa
gacatagggacagacctgcctacattactgtggagattagtgcaggagatacctgacgga
gccatgttgaggctgggcatgaccaaccctccttacatcctggaacacctggaggagatg
gcaaagattttaaatcatccacgtgtttatgcctttcttcatgttcctgtgcagtcagcc
tcagacagtgtcctgatggacatgaagagggaatattgcattgatgacttcagaagagtt
gtggactttctcaaagacaaagtacctggagtaacaattgctactgatataatctgtgga
tttcctggtgagactgaagaagactttgaggacactttaaaacttgtgaagcactatcat
tttccgagtttgttcatcaaccagttttaccccagacccggtacacctgctgctaaaatg
gagcaagttccagcacatgtgaaaaagcaaaggactaaacaactctctgaactcttccac
tcttacaacccctatgaccacaaggtaggagagaggcaatttgtgctggtgacagaggag
tcttttgatgcccaatactatgtttcccacaacaagttctacgaacaggtgctggtacca
aaaagagctgatttcaaaggaaagatgattgaagtagacatctacgaggcagggaagcac
tttatgaaggggcgaccagtagaagacagcaagcctttcactccctctattgcagtgcct
cttcagaaaggagaagtctccggtctgttgcaggaacatatggccaatggagtcaaagga
gctgcttctgtgccacctgactctgcgctccgggtcggcttgtacagtctggacagagaa
ctgctgaagaaactggggatttgcattggactagcagccgccgtcttggcctttattatt
gagaagttctattaa
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