Poeciliopsis prolifica (blackstripe livebearer): 129368769
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Entry
129368769 CDS
T09758
Symbol
vcam1b
Name
(RefSeq) vascular cell adhesion protein 1b isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129368769 (vcam1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pprl04090
]
129368769 (vcam1b)
04091 Lectins [BR:
pprl04091
]
129368769 (vcam1b)
CD molecules [BR:
pprl04090
]
Proteins
129368769 (vcam1b)
Lectins [BR:
pprl04091
]
I-type lectins (Siglecs)
129368769 (vcam1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
C2-set_2
C1-set
ICAM1_3_5_D2
Ig_5
Ig_4
Ig_C17orf99
ICAM_N
REJ
Motif
Other DBs
NCBI-GeneID:
129368769
NCBI-ProteinID:
XP_054899856
LinkDB
All DBs
Position
Unknown
AA seq
804 aa
AA seq
DB search
MDGCLQLLSVVLLMSSWCVQGLRVSLSPRRPLLRLGSHQHMVCQVHGCPTEPSISWATVN
DRPLGASVSANRTHSTLTFDPVKMEDEGQLACKARCGDDRVESRASVSVYSFPSDPEIAG
QDRLSDRVEATLTCRVPSLFPAGDLNLTWVRGDTVLKSTRGSGSSSIQFLPLREDSGENI
TCRATLELPGLPPGQRTRETTATLNVRYAPGLMNISDPVALMSGSPLTLSCSAEGNPEPT
ITWTAGGRRLPGGRGGQLVLSAVKLSDAGRYECEARNSEGNQTAAVNVTVLAPPTSTSLS
VEPGEEVVEGQQVNFTCSSVGAPPPSLVLRRKGEELLRTDSTPLLSFSLPSASLEDSAHY
ECEASNQYGSQQESRSITVSAHPLQLYSSPQVSAERGSALILTCNASGCLHPPTFSWRRT
DRNRTLLQRTKPQDGQSHLHLLNLDLRHQGGYSCEAECDSVTRTREIHVQVYSFPSDPVL
EDPGPVQLGQQVQLRCDVTDIFSANQLRFRWLSGNRTVMAETHRFSGSLQNVSSVLQLRA
EEAARVVTCSVELLTADRGVWRSRGTSVPLQIHYPPRSTVLSVCPGEEVLEGQQVTLTCR
SDGAPPPAVVLRRNGEELLRSDANSSSSLSLRISSTLLEESGLYQCEASNQYGSQLVSNF
ITVKAPPRNTTVHIFPSTEVQEGQNVTVCCQSISFPPPAVILKKLSNGTELFSTSGIFQL
VNVTSSDSGLYQVNVSNDLGSEVRVFSIRVREVRTGFPPGLSIILVSAAGVAAGLTASAL
ILDYMRRSRKKGFYQLPQSAPPSA
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggacggctgccttcagctcctctcagtcgtgctgctgatgtcatcgtggtgcgttcag
ggcctccgggtcagcctgtcacccaggcggcctctgctccggctcggctcccaccagcac
atggtctgccaggtccacggctgtcccacagaaccgagcatttcctgggccaccgtcaac
gaccggcctctgggggcgtccgtcagcgccaacagaacccactccactctgacctttgac
cccgttaagatggaagacgaagggcagctggcgtgtaaggccaggtgtggagatgatcgg
gtggagagccgagcctccgtcagcgtttactcgttcccatcggaccccgagattgccggg
caggaccgcctcagtgaccgcgtggaggcgaccctcacctgccgggtgcccagcctgttc
ccggccggggacctgaacctcacctgggtccgaggagacacggttctgaagagcaccagg
ggctctgggtccagctccatccagttcctgcccctcagggaggattcaggagaaaacatc
acctgccgggcgacgctggagctgccgggtctgccgccgggccagaggaccagagagacc
accgccaccctgaatgtccgctacgctccgggcctcatgaacatctccgacccggtggcg
ctgatgtctggctctccgctgactctcagctgttctgctgagggaaaccccgagccgacc
atcacctggacggcaggcggtcgccgtctgcccggaggtcgcggaggtcagctcgtccta
tcggcggtgaagctttccgacgccggacggtacgagtgtgaagccagaaactcagaagga
aaccaaactgcagctgtaaacgtcacagttttagctccgcccactagcacctccctctca
gtggagccaggtgaggaggtggtggagggccagcaggtgaatttcacctgcagctctgtg
ggagctccgcctcccagcctggttctgaggagaaaaggggaggagcttctgaggactgac
tccacccccctgctcagcttcagccttccctccgcgtcactggaagactccgcccactac
gagtgtgaagcctccaaccagtatggctcccagcaggagtccaggtccatcactgtgagc
gctcacccgctgcaactctactccagtcctcaggtgtcagcggagcgcggctcggctctg
atcctcacctgcaacgcctctggctgcctccatccgcccaccttcagctggaggaggacg
gaccggaaccggaccctcctccagaggacgaagccgcaggacggccagtcccacctccac
ctgctgaaccttgacctccggcaccagggaggctacagctgtgaggccgagtgcgactcg
gtcaccaggaccagagaaatccacgtccaggtttactcgttcccatctgacccagttctg
gaggatcccggtccggtccagctgggccagcaggtccagctgcgctgtgatgtcaccgac
atcttctcggccaatcagctgcggttccgctggctgtcggggaaccggaccgtcatggcg
gagacgcacaggttctccggctccctgcagaacgtgtcgtccgtcctgcagctgagggcg
gaggaggcggcgcgggtcgtgacctgcagcgtggagctgctgacggcggaccgaggcgtc
tggaggtccagaggaaccagcgtcccgctgcagatccactatcctcccaggtcgaccgtt
ctgtccgtctgtccaggtgaggaggtgctggagggccagcaggtgacgctgacctgccgc
tcggacggagctccgccccccgccgtggtgctgaggcggaatggggaggagcttctgagg
agcgacgccaactcctcttcctcgctctccctccgcatctcctccacccttctggaggag
tcgggcctctaccagtgtgaagcctccaaccagtatggctcccagttggtctccaacttc
atcactgtcaaagctcccccaaggaacactaccgtccacatctttccttctacggaagtc
caagagggccaaaatgtgacggtgtgctgccaaagcatcagcttccctccaccggcggtg
atcctgaagaagctgagcaacgggacggagctgttctccaccagcggcatcttccagttg
gtcaacgtcacttccagcgactcgggcttgtaccaggtcaacgtcagcaacgacctgggc
tccgaggtcagagtcttcagcatcagagtcagagaggtcagaacgggatttcctcccggt
ttgagcatcatcctcgtctcggccgccggcgtcgccgccgggctgacggcctccgctctg
atcctcgactacatgaggagatccaggaagaaaggcttctaccagctgccgcagtccgcg
ccgccgtcagcgtga
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