Poeciliopsis prolifica (blackstripe livebearer): 129373947
Help
Entry
129373947 CDS
T09758
Symbol
grin2ca
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04020
Calcium signaling pathway
pprl04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
129373947 (grin2ca)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129373947 (grin2ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprl04040
]
129373947 (grin2ca)
Ion channels [BR:
pprl04040
]
Ligand-gated channels
Glutamate (ionotropic)
129373947 (grin2ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
NMDAR2_C
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
129373947
NCBI-ProteinID:
XP_054908080
LinkDB
All DBs
Position
Unknown
AA seq
1414 aa
AA seq
DB search
MGLRLGSWSDSLWWPPPLPLLLLLFCTTPSSLGRPFGFPVPSVNVAVVFSGPAYQTEIKG
RLSRENFMDLPLEVNPITVLVNNTNPRALLTRICDTLSTNRVHGVVFEDNVGSEAVAQIL
DFISTQTAVPIVGISGGSAVVLPYKGEGSNFLQLGSSIEQQINGMFKVMEEYNWDSFVVI
TSLYPGYEAYVDYIKSFTDTSYFMWDLQDVLSFDMSADSTNDIRARRLLQQIDAQVLLVY
CSHEEAQYLFSLATEVGLIGPGYIWIIPSMAVGNPDIPPPDSFPVGLISIITDRWRMSLR
KRVRDGVAIVVKGVQSFRKQRGFIPEGHSDCHNPIKQSAINDTLFKHMLNVTWEHNDFSF
NSNGYLVNPAMIVITLDRERQWDKVGTYEMGILQMRYPVWPRFGSYLEPVSDYRHLTVAT
LEERPFVIVEAVDPVTGTCVSNTVPCRRQSNKTEAIVGHTEPYTKLCCKGFCIDILKKLS
RTIKFSYDLYLVTNGKHGKLVRGIWNGMIGEVFYKRADMAIGSLTINEERSEIIDFSVPF
VETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYCSPVGYNRSL
VSAKDPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTAN
LAAFMIQEQYIDTVSGLSDKKFQKPQEQYPPFRFGTVPNGSTERNIRSNYPEMHSHMVKY
NQKGVEDALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKD
SRWKRPIDLALLQFLADGDTQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGVFYMLLVAM
GLSLLVFAWEHLLYWKLRHSVRKSDRLDFLLAISRGIYSCFNGVEQTDRNGSLQSPDITT
NYSQANMLKMLRTAKDMVSSARVENSLDSATKTIENWSRRGVDNVRAGLPPRVTTTDVTH
SRLPYISSITDNHSPYPQRAITPTFPVHYGDTSTQPLLEKPRVVTRPTPLRYTLPTRSSQ
HLLERTLPISSLSSPHIAMRDPTPCGTSNPHHSSRLYVENQGRHTASPFVSYREFQVPDI
YVEHKGPLRRKFSYPPDCVSRRRRSFSYLFNNPEPRVRVDYDEPRSCFAELRANHLLNNQ
APHGMAMACTPGHYPGSSTSCNSCMKSYLEPEMDDIPLLGKDKLNRRASFLKATWGNDRI
RQVDETKPSTSTAPSTRTDIPDLFPQVVGPNPKPHRLYGSLGHNLSCYPLSAEPAYLDPA
HMGSYPYKQKIKYADSTRLPSYREAILQNAAALRRSSSTVVHRHYSTYLNSYTDLPVYVG
PLPQGPSQFYNSSKDMCHLFPCTSHCPENTAMHPRMTDRPVVYHNNMFGPYDGPKREDLG
SGSRDRRQVLVARRVNSPYVPKPWGRVSSLESEV
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgggccttcgtctgggcagttggagtgactccctgtggtggccgccaccgctgccgctg
ttgctgctgctgttctgcacaaccccctcctccttgggtcggcccttcgggttccccgtg
ccctccgtgaacgtagcggtggtgttcagcggcccggcctaccagacggagataaagggc
cgtttgagccgggaaaacttcatggacctgccactggaggtgaatcccatcactgtgctg
gtcaacaacactaacccacgcgccctgctcacccggatctgcgacaccctgtcaactaac
cgggtccacggcgtggtgtttgaggacaatgttggctctgaggctgtggcacagattctg
gacttcatctccacacagacagccgtccccattgtgggtatcagcggcggctctgcagtg
gtcctgccatacaagggtgaaggttccaacttccttcagctgggttcctccatcgagcag
cagattaacggcatgttcaaggtgatggaggagtacaactgggacagctttgtggtcata
accagtctgtacccgggttacgaagcctacgtggattatatcaagtccttcacagacacc
agctacttcatgtgggacctgcaggacgtgttgtccttcgacatgtcggctgatagcacc
aacgacatacgagcacggaggctgctgcagcagattgacgcccaggtcctgttggtctac
tgctcccacgaagaggcgcagtaccttttttcattagcaaccgaagttggactaatagga
ccgggctacatctggattatccccagcatggccgtgggaaacccagacatcccgccacct
gacagcttccctgtggggttgatcagcatcatcacggaccgctggaggatgagtctgagg
aagagggtgcgggatggggtagccattgtggttaaaggtgtccagagcttcagaaagcag
agaggcttcattcctgagggccacagcgactgtcacaaccctatcaaacaatctgccatc
aacgacacgctgttcaaacacatgttgaatgtgacatgggagcacaatgacttctccttc
aacagtaatggctacctggtgaatccagccatgatagtcatcactctggacagagagaga
cagtgggacaaggtggggacgtacgagatgggaatcctgcagatgagatacccggtgtgg
ccgcggtttggctcctaccttgagccggtgtcagattacagacacctgactgtggctaca
ctagaggagcggccctttgttattgtggaggcagtggaccctgtgactggtacttgtgtt
agcaacactgtaccctgccgacgacagtccaacaagacagaggctattgtgggtcacact
gagccatacaccaagctgtgctgtaaaggtttctgcatagacatcctgaagaaactctca
cgcaccatcaagttctcctacgacctttacctggttaccaacggcaagcatggcaagctg
gtcagaggcatctggaacgggatgatcggagaggtgttctacaagcgagcggacatggct
atcggttcactgaccataaacgaagagcgttcagagatcattgatttttcggtgccattt
gttgagacgggaataagtgtgatggtggctagaagtaacgggactgtctctccatcagca
tttttagaaccatacagtccagcagtctgggtcatgatgttcgtcatgtgtctgacagtc
gtggccatcacagtgttcgtctttgaatactgcagtccagttgggtataaccgcagcttg
gtcagtgccaaagatcccggaggtcccacatttactattggaaaatcagtttggctactg
tggggaatcgtcttcaacaattcagttcctattgagaatccaaagggtacaaccagtaag
atcatggttctggtctgggctttctttgctgtcatcttcctggcttcgtacacagcgaat
ctggctgcctttatgatccaggagcaatacatcgacactgtttccggactgagtgacaaa
aagtttcaaaagccacaggagcagtatcctccgttccgctttggtacagtcccaaatggc
agcacagagcgcaacataaggagtaactacccggagatgcactcccacatggtcaaatac
aaccaaaaaggagtagaggacgctctcaacagccttaaaacagggaaactggatgccttt
atctatgatgctgctgtgctgaattacatggctggcaaagacgaaggatgcaaactggta
accattggcagcgggaaagtgtttgctactactggttatggaattgctctccagaaggat
tcacgctggaaacgccccatcgacctggccctgctgcagttcctggctgatggtgacacc
caaaagttgcaaaccgtctggctcacaggtatctgtcgcaacgaaaagaaagaagtcatg
agcagtaagctggacatcgacaacatggccggagttttttacatgctgcttgtcgccatg
ggcctaagcctactggtgtttgcctgggaacatctgctctactggaaacttcgccattca
gttcgcaaatcagaccgattggactttctcctggctatcagtagaggcatctacagctgc
tttaatggagtagagcaaactgaccgcaacgggagcctgcagagtccagacatcaccacc
aactacagtcaagccaacatgcttaagatgctgaggacagccaaggacatggtgtcctct
gccagagttgagaactctctcgatagcgccaccaaaacaatagaaaactggagcagacgt
ggagtcgacaatgtgcgagctggcctgcctcccagagttacaaccacagatgtgacccac
agtcggctaccctatatctccagtataacagacaatcattccccctaccctcagagggcc
attacaccaacgttcccagttcattatggggacacatccactcagccccttctggagaag
cccagggtggtaacccgacccactcctcttcggtacacgctgcctacacgcagcagtcag
catctgttggagagaactttgcccatttccagcctcagcagcccacacatcgccatgaga
gatccaactccctgtggaacgtccaatccccaccacagcagcaggctgtatgtggaaaac
cagggccggcacacagcatccccttttgtttcctacagggagttccaggtacctgacatt
tacgtggagcacaagggacccctccgcaggaagttcagctaccccccagactgtgtaagc
cggagacggaggtctttcagctatttgtttaataatccagagccaagagtgagagtcgac
tacgatgaaccacggtcttgctttgctgagttgagagccaatcacctcctaaacaaccag
gcccctcatgggatggccatggcctgcactccaggacactaccccggcagcagcaccagc
tgcaactcctgcatgaaatcttacctggagccagaaatggacgacatccccctcttagga
aaggacaagttaaatcgacgagcctcatttcttaaagccacgtggggcaatgatagaatc
cgtcaggtagatgaaacaaagccttccacatccacagctccgtccacccgaacagacatc
cctgatttgtttccacaggtggtggggccgaatccaaagcctcacaggctgtacggcagt
ttggggcacaacctgtcctgttaccccctttccgctgagccagcctacttagacccagcc
catatgggttcttacccctacaagcaaaagataaagtacgctgactctacccggctgccc
tcttacagggaagctattttgcagaacgccgctgctctgcgccgatcctcctctacggtg
gtgcacagacattattccacctacctgaactcatacacagatttaccagtgtatgtgggg
cctctcccacaaggaccgtcccagttctacaacagctcaaaggacatgtgccacttgttt
ccctgtaccagccactgcccagaaaacacagcaatgcaccccagaatgacggacagacca
gtggtttaccacaacaacatgtttggaccttatgatggcccaaagcgggaggacttgggt
tcaggaagccgagatcggaggcaagtccttgtggcgcgaagagtcaacagtccctatgtg
ccaaagccctggggcagggtctccagtctggagtctgaggtctga
DBGET
integrated database retrieval system
