Pimephales promelas (fathead minnow): 120462059
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Entry
120462059 CDS
T08155
Symbol
polr3b
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03020
RNA polymerase
pprm04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120462059 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
120462059 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprm03021
]
120462059 (polr3b)
Enzymes [BR:
pprm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120462059 (polr3b)
Transcription machinery [BR:
pprm03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
120462059 (polr3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
120462059
NCBI-ProteinID:
XP_039506425
LinkDB
All DBs
Position
Unknown
AA seq
1130 aa
AA seq
DB search
MLQEEFGEMTPQQLAAPVHTVEEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMKAN
EKITSDADPMWYLKYLNIYVGMPDVEESFNVTRPVAPHECRLRDMTYSAPITVDIEYTRG
SQRIIRNALPIGRMPIMLRSSNCVLTGKTQLEFSKLNECPLDPGGYFIVKGQEKVILIQE
QLSKNRIIVEQDRKGAVGASVTSSTHEKKSRTNMIVKQGRFYLKHNTLSEDAPIAIIFKA
MGVESDQEIVQMIGTEEHVMAAFAPSLEECQKAQIFTQTQALRYIGNKVRRQRMWGGPKK
TKMEEARELLASTILTHVPVKEFNFRAKCIYLAVMVRRVILAQGDNKVDDRDYYGNKRLE
LAGQLLSLLFEDLFKKFNSELKKIADQIIPKQRAAQFDVVKHMRQDQITNGMVNAISTGN
WSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSD
TPEGEACGLVKNLALMTHITTDMEDGPIVKLAFNLGVEDINLLCGEELSYPTVFLVFLNG
NILGVIRDHQKLVYTFRLMRRAGFINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKNGQ
PAVKNKHIEELSQGYRTFEDFLHESLVEYLDVNEENDCNIALYEHMIAKETTHLEIEPFT
LLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQKPMVKTK
TIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLRRYT
NQTFDKVMGPMLDAETRKPIWRHSILDADGICLPGEKVENKQVLVNKSMPTVTQTPLEGS
AQPGQPQYRDVPVSYKGTTDSYIEKVMISSNAEDAFLVKILLRQTRRPEIGDKFSSRHGQ
KGVCGLIVPQEDMPFCDSGICPDIIMNPHGYPSRMTVGKLIELLAGKAGVLDGRFHYGTA
FGGSKVKDVCEDLIRYGYNYQGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMHAR
ARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCGQC
GLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLARYNE
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgctacaggaggagtttggggagatgactccccagcagctcgctgctcccgtacacact
gtggaggaaaagtggaagctgcttccagcctttttgaaggttaaaggcttagtaaagcag
cacattgattccttcaattacttcatcaatgtggagataaaaaagatcatgaaggcgaat
gagaagatcacgagtgatgccgacccaatgtggtatctaaaatatctcaatatctacgtt
ggcatgcctgacgtagaagaaagttttaatgtaaccagaccagtggcaccacatgagtgt
cgtctgagagacatgacatactcagctcccatcactgtggatatagagtacacccgaggc
agccagagaatcattcgcaatgctctcccaatcggaaggatgccaattatgctgcgaagc
tccaactgcgtcttgacaggaaagacccaattggagttctctaagctcaatgaatgtccc
ctagatccaggtggttattttattgtgaaagggcaagaaaaggtcattctcattcaggaa
cagttgtccaagaaccgcatcattgtggagcaagatcgcaaaggtgctgtgggagcctct
gtcaccagttctacacatgagaaaaagagcagaaccaacatgattgtgaaacagggacgc
ttttacctaaagcacaacaccctctctgaagacgcacctatcgctatcatctttaaggcc
atgggagtggagagtgaccaggagatagttcagatgattggcacagaggaacatgtcatg
gctgcatttgctcccagtttggaggagtgccaaaaggcccaaatattcacccaaactcag
gcactaagatacattggtaataaagtgaggcgtcagcgcatgtggggcggccccaagaaa
accaagatggaggaggccagagagctgttagcttctaccatccttacccacgtacctgtt
aaggagtttaactttcgagctaagtgtatctacctcgctgtgatggtacgtagagttatt
ctcgctcaaggggacaacaaggtggacgatcgagattactatggaaacaaacgtctggag
ttggctggccagctcctgtccctgctgtttgaagatctgttcaagaagtttaactcggag
ctgaagaagatcgccgaccagatcatccccaagcagagagcagctcagtttgacgtggtg
aagcacatgagacaggaccagatcaccaacggcatggttaacgctatctccactgggaac
tggtctctaaagaggtttaagatggacaggcagggtgtgactcaggttctctcccgcctc
tcctacatctcagccttgggcatgatgacaaggatctcctctcagtttgagaaaaccagg
aaggttagcggtccccgctcccttcagccctcccagtggggcatgttgtgcccttcagac
acacctgaaggagaggcttgcggtctggtgaagaatctggctctgatgacccacatcacc
actgacatggaggacggccccatcgtcaagctggcatttaacctgggagtggaggacatc
aaccttctttgcggagaggagttgtcctaccccacggtcttcctcgtcttcctcaatggt
aacattcttggagtgatcagagaccatcagaagttggtctacaccttcaggctaatgcga
agagctggttttataaacgagtttgtgtctatctcaactaacttgactgaccgctgtgtg
tatatttcttctgatgggggccgtttgtgcagaccctacatcattgtgaagaatggacag
ccagctgtgaagaacaaacacattgaggaattgtctcagggttacagaacttttgaggac
tttcttcatgagagtctggtggagtatctggatgtaaatgaggagaatgactgtaacatt
gcgttatatgagcacatgatcgccaaggaaacgacccatttggagatcgagccattcacg
ttgctgggggtctgcgctggtttgattccttatcctcatcataaccagtcccccagaaac
acctaccagtgtgccatgggcaagcaggctatgggaactattggttataaccaaagaaac
cgtatagacactctgatgtacctgctggcatacccacagaagcccatggtgaagacgaag
accatcgagctgattgactttgagaagcttcccgcgggccagaacgccactgtggctgta
atgagctacagtgggtatgatatagaagatgccctggtgcttaataaggcatctcttgac
agaggctttggtagatgtttggtgtacaagaatgctaagtgcaccttgaggcggtacact
aaccagacctttgacaaggtgatgggtccgatgctggatgccgaaacacgcaagcccatt
tggagacacagcatcctggatgccgacggcatatgcttgcccggtgagaaggtcgagaac
aagcaggtgctagtgaataagtccatgcccactgtcacccaaactccactggagggcagc
gcccagccaggccaaccacaatacagagacgtgccagtctcgtacaaaggaacgacagac
tcctacattgagaaggtgatgatctcctccaacgccgaggacgccttcttggtcaagatc
ctgctcaggcagacacgtagaccagagatcggagacaagttcagcagtcgacatgggcag
aaaggtgtgtgtggactgatcgttcctcaggaggacatgcccttctgtgactccggaatc
tgtcctgacatcatcatgaaccctcatggttatccctccagaatgactgttgggaagctg
attgagctgttggctggtaaagcaggggttctggatggacgttttcactatggcactgct
ttcgggggcagtaaagtgaaggacgtttgtgaggatctgatccgctatggatacaattac
cagggcaaggattatgtcacctcaggcatcacaggggaacctttggaagcctacatctac
ttcggtccagtctactatcagaaactgaagcacatggtgctggataaaatgcatgccaga
gcacgtggtccgagagcagtgcttactaggcagcccactgagggacgttccagggatggt
ggtctccgtctgggcgagatggaaagagactgtctcattggctacggagccagcatgctg
ctgcttgagcgactgatgatctccagtgatgcttttgaggtggatgtgtgcgggcagtgt
ggcttgctgggatattcaggatggtgtcattactgcaagtcttcgtgtcatgtgtcgtct
ctacgaattccatacgcctgcaaactgctcttccaagaactgcagtccatgaacatcatc
cctcgcctcaaactggctcgctacaatgagtga
DBGET
integrated database retrieval system
