Pimephales promelas (fathead minnow): 120462175
Help
Entry
120462175 CDS
T08155
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03020
RNA polymerase
pprm04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120462175 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
120462175 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprm03021
]
120462175 (polr3a)
Enzymes [BR:
pprm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120462175 (polr3a)
Transcription machinery [BR:
pprm03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
120462175 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
120462175
NCBI-ProteinID:
XP_039506623
LinkDB
All DBs
Position
Unknown
AA seq
1402 aa
AA seq
DB search
MVKEQFRETDVAKKISHIHFGMKSAEQMRQQAHIQVVSKNLYSQDTSHTPLQYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYLDLELPCFHVGYFKAIVGILQMVCKTCSRILLSKE
EKLQFLDYLRRPGLVYLQKRGLKKKISDKCRKKTICVSCNAFNGPVKKCGLLKIIHEKYK
TTKKVIDPMVSDFLQSFDVAIEHNKEVESLLARAQENLNPLVVLNLFRRIPNEDIPLLLM
NPESGKPADLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMSG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPEKVNKANIEMLRKLVRNGPEVHPGANF
IQQRHMQMKRFLKYGNREKMAQELKYGDVVERHMIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRTKACQIVASILVGKDEKVRISLPHPAILKPIRLWTGKQI
FGLILKPSKSCPVKANLRTKGKQYCGKGEDLCFNDSFVVIQNSELMCGSLDKGTLGSGSK
NNIFYILLRDWGQDEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKQELLDGG
YKKCDEYIEALKTGRLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVFGCPGEPALSRNELVLTTDSIMKRKDFLC
CRDTFLEALTDTGSDKYLQEIRKFIKTISERIKKTRDKYGINDNGTTEPKVLYQLDRITP
TQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVP
RIKEIINASKNISTPIISASLDCDDDADFARLVKGRIEKTLLGEISEYIEEVFLPDDCFI
LVKLSLERIRLLRLEVNAETVRYSICTSKLRVKPGDIAVHGEAVVCVSPRENSKSSMYYV
LQSLKQELPKVVVQGIPQVSRAVIHIDEQSGIKKFKLLVEGDNLRAVMATHGVNGNRTTS
NNTYEVEKTIGIEAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGL
AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHSATK
EPSPPRRPLLFDSPDFHIPLVQ
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagtttagagagacggatgtggccaaaaagataagtcacatccatttt
gggatgaaatcagcagaacagatgagacaacaggctcatattcaggtggtcagcaagaac
ctgtacagccaggacaccagccacacaccactgcagtatggagtcctggaccaccgcatg
ggtaccagtgagaaggacaggccgtgtgaaacctgtgggaaaaacctcgcggactgtctc
ggacactatgggtatctggatctggagctgccctgctttcacgtcggatacttcaaagct
attgttgggatcctacagatggtctgtaagacgtgctctcgcatccttctctccaaagag
gaaaagctccagtttctggattacctgcgcagacccggactggtgtatctacagaagcgc
ggcctcaagaagaagatctcggacaaatgcaggaagaagaccatatgcgtgtcctgcaat
gcgttcaacggccccgtgaagaaatgcggcttgctgaagatcattcatgagaagtacaag
accaccaagaaagtcatcgatcccatggtgtctgatttcctccagtcgtttgatgtcgcc
attgaacacaacaaagaagtggagtcactgctggccagagcacaggaaaacctcaatcct
ctggttgtgttgaatcttttccggaggattccaaacgaggatattcctcttctgctgatg
aatcccgaatccgggaaacccgcggacctgatcctgacgcgcctgttagttcctcccctg
tgcatccggccctccgtcgtcagcgacctcaaatccggcaccaatgaagacgatctgacc
atgaagttaaccgaaatcatcttcctcaacgacgtcatcaagaagcaccgcatgtcagga
gccaaaacccagatgatcatggaggactgggactttctgcagctccagtgcgctttgtac
atcaacagtgagctttcggggatcccgctcaacatggcacccaagaaatggacccgtggc
tttgtgcaaagactcaagggaaaacaggggcggtttcgtggtaacctgtctggaaagagg
gtggatttctccggcagaacggtcatctctcccgacccgaacctgaggattgatgaggtc
gctgtaccggttcacgtcgccaaaatcctcacctacccggagaaggtgaataaagccaac
attgagatgttgaggaagctagtgcgcaacggtcctgaagttcacccaggagcaaatttc
atccaacagagacacatgcagatgaagaggtttctgaagtacggtaatcgagagaagatg
gctcaagagctgaagtacggggacgtggtcgagagacacatgattgatggcgacatcgtg
ctgtttaaccggcagccttctctgcataagctcagcatcatggctcatatcgcgcgtgtg
aaacctcatcggacgtttcgcttcaacgagtgtgtgtgcacgccgtacaacgctgacttc
gacggagacgagatgaacctccaccttccgcagacagaagaagccaaagccgaagcgctc
gtcctcatggggacgaaggcgaatctggtcactcccagaaacggtgagccgctgatcgca
gccattcaggactttctgacaggtgcttacctgctcacgctcaaagacactttcttcgac
cggaccaaagcctgtcagatcgtcgcctccatcctggtgggaaaagacgagaaagtcagg
atctccctccctcatcctgcgatcctcaagccgatccggctgtggacggggaagcagatc
ttcggtctgatcctcaagcccagtaagagctgtccagtgaaggccaacctgcgcaccaaa
ggcaaacagtactgcgggaaaggggaggatctgtgtttcaacgactcctttgtggtgatc
cagaacagtgagctgatgtgtggcagtctggataaaggaactctgggatccggatccaag
aacaacatcttctacatcttgttgcgagactggggtcaagacgaggcggcggatgccatg
tcacgcctggcccgtctggctcccgtttacctctcgaatcgaggcttctccatcgggatc
ggagacgtgacgcccgggcaggggctcctgaaggccaagcaggagctgctggacggtgga
tataagaaatgtgacgaatatatcgaagccctgaagacgggccggttacagcagcagccg
ggctgcaccgccgaggaaacactcgaggcgttaatcctaaaggagctgtcagtcatcaga
gatcacgctggcagtgcgtgtttgagggaactggacaaaagcaacagcccgctgatcatg
gccctgtgtggatccaaaggttccttcattaacatctcacagatgatcgcttgcgtcggg
caacaggccatcagcggctcgcgtgttcctgacggctttgagaaccgttcgctgcctcac
ttcgaaaagcactccaaactccctgctgcgaagggctttgtggcggacagcttttattct
ggcctgacgcccacggagttcttcttccacaccatggctggtcgagaagggctggtcgac
accgctgtgaaaacagcagagacgggatacatgcagaggcgtttggtgaagtctctggag
gacttgtgctctcagtacgatctgacggtgcgcagctccaccggtgacatcattcagttc
atctacggcggagacggactagatcccgcggccatggaggggaaagatgagccgctggag
ttcaagagagtcctggacaacatcagagcggtgttcggctgtccgggtgagccggcgctg
agcagaaacgagctggttttgaccaccgactccatcatgaagagaaaagactttctgtgc
tgcagagacacgtttctggaggctctgacagacactggcagtgacaagtacttacaggaa
atcagaaagttcataaaaacaatttcggagagaatcaaaaagacacgcgacaagtatggc
atcaatgacaacggaacaacagagcctaaagttctgtaccagttggacaggatcactccg
acccagctggagaagtttctggaaacctgcagagacaaatatatgagggcgcagatggag
ccgggctctgccgtcggagcgctgtgtgcccagagcatcggggagcccggcactcagatg
accctcaagacctttcacttcgccggggtcgcctccatgaacatcactctgggagtgccg
aggatcaaagagatcatcaatgcgtccaagaacatcagtacgcccatcataagtgccagc
ctggactgtgatgacgatgcagacttcgctcggctggtgaagggtcgcattgagaagact
ctgctgggagagatctccgagtacatcgaggaggtgttcctgccggatgattgttttatc
ctggtgaaactgtcgctagagaggattcgtcttctgaggctggaggtgaacgcagagacc
gtacgctactccatctgcacgtcgaagctgcgcgtgaagccgggtgacatcgcggttcac
ggagaggccgtggtgtgtgtgtctcccagagagaacagcaagagctccatgtactacgtc
ctgcagtcgctcaaacaggagcttcccaaggtggtggtccagggcatccctcaagtgtcg
cgtgccgtgatccacattgacgagcagagcgggataaagaagttcaaactgctggtggag
ggagacaatctcagggctgtcatggcaacacacggcgtcaacggcaaccgaacaacatcc
aacaacacgtatgaggtggagaagacgataggcatcgaggcagcgagatccaccatcatt
aatgagatccagtacaccatggtgaaccacgggatgagcatcgaccgccggcacgtcatg
ctgctcgcggacctcatgtcctataagggagagattctgggcatcactcgcttcggtctg
gcgaagatgaaggagagcgtcctcatgctggcgtccttcgagaagacggccgatcatctg
ttcgatgctgcgtacttcggccagaaggactcggtctgcggtgtgtccgagtgcattata
atgggcatccccatgaatatcggcactggactctttaaactcctgcacagcgccacgaag
gagcccagtcccccccgccggccgctgctcttcgacagtcctgacttccacatccccctg
gtgcagtga
DBGET
integrated database retrieval system
