Pimephales promelas (fathead minnow): 120463323
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Entry
120463323 CDS
T08155
Symbol
parp4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03410
Base excision repair
pprm04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120463323 (parp4)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
120463323 (parp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pprm03032
]
120463323 (parp4)
03036 Chromosome and associated proteins [BR:
pprm03036
]
120463323 (parp4)
03400 DNA repair and recombination proteins [BR:
pprm03400
]
120463323 (parp4)
Enzymes [BR:
pprm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
120463323 (parp4)
DNA replication proteins [BR:
pprm03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
120463323 (parp4)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
120463323 (parp4)
DNA repair and recombination proteins [BR:
pprm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
120463323 (parp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VIT
PARP
VWA_3
VWA
VIT_2
VWA_2
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
120463323
NCBI-ProteinID:
XP_039508254
LinkDB
All DBs
Position
Unknown
AA seq
1789 aa
AA seq
DB search
MAVFENCTVVLDVKNVPYKEKNKLRLALLDNGGNISYVINKECSFVVTSSVNELSSNRQS
SIQKLRIPVVGMQYVWSCLDEGHLLPLTEHDLAPQLAYPTSEFISCPEGKVSTHIQEKEE
FKGQTEIAALEKGGHSLSRFRVYRGGDHELPEFPSHFQVAKYSVFEMVKPKTLSVLELQS
GRGRKGQQYRVLSSILHEAESAVVQDKLVHCVTSEDAVEAYLLLMKEMETQGFTRSHTLP
PEVERLASHSLQQLLLEEKLNCSSLSQEVGVFVELVWTEALGSLSNILTVPVSRISLNDV
SRVEGLLLQAQKTQKEDEVKALLEEVNTLLPLRMIDPPSKHKLVSQKLDLCQLIRDILNV
SEATLGSPSPSSLGKYRALRCSIEVVPPQNPEFHVVSQLLHERPVQIQQILRVSRGVELQ
MFWEDIGNIKPLLHSTSPSSFVGILSRGLLLPRVGVEQHGIERTDIGNLGGGIYFSDSLN
TSVKYSKPSVTDGSRLLLVCEVALGRCKDLLKKDTTLTCAPDGYHSVHGVHRTPNRLSEF
EDDEFVVYNTEQIRLKYVVQYTLEGDELKEFQPHVNTVVELTQLTDTSDVLSSDDSEGLE
STKNPLEEMTAGLLDSNGQKIPLQAVNVRCKLMDLLCQVIIFQTYTNKSPVPIEAKYVFP
LEETAAVCGFEAFINGKHVIGKVKEKEQARKEYKQAIEKGHGAYLMDQDAPDVFTISVGN
LPPGATVLIKVTFITELVVRSGSIVFSLAGSVAPWQQSAALNTTTQATVEKIGVTELQSE
GEFSLSMSIEMPYEIINLSSSHRIKTKMTDCKAVVSTLPGQTLGSEGLQVSFSLSNIHMP
RMWVENHPDKYSQACMLVFYPDFKSSGVSSSGDPSSVSDVVILLDSSKSMQGDAMLNARR
IALQVLKSLDRSLKINIISFSTDYKEAFPAPMPLDEASEPARKFIMSCSGAGGGTELWRP
LQSLSLLSPSRGVRNILLLSDGHVQNQPLTLELVRENSRHTRLFTCGLSLTANRHMLRAL
AQAGGGTCEFFDTKMKHTWAEKVRAQVQRMESPGCRSVAVKWQQFNPTAPPPVQAPSQLH
SLFSDCHTLIYGFVPHCTQATLFGDLSGNEIKTMVSTTELQKTKGTFLHKLTARAIIRDY
EDGILGNSEAEHEGKKAELKSYIIELSKEFSILSQFTSFVAIEEREQNEPDSGWTDIPKL
ISEEDVDILPYMGWSEEKLMVEDIICADNMDSEEWRSSGSTSPVQLFSAKRAAKRLYYDA
NDSEDDYEDPIEDFEMDLSAALPRSCFRSSWRPSRFDGAIRGSSSSYVSDPKSVLLASEE
PTGGVSMSDRLPPPTVASKSLNFQIHCYNESVESLSSNYNLASQTEVTPIVRTMEPPSGA
RWMSPRPSGGALMSKSGSMSDRLPPPPPPPPAAKVASSVPPPLHISESVDSLLCETYADG
LPLALELEGPTPPLFAGPPPNLSLASDPFLSSRAPPPAPLFGRPSTSFSMVKFPAVQCLS
QIQRDASTPPIFEGRTFPPRLASKQYSPITPSYSLGSFCGKASRESSVLQSTNEPLSLFG
SSSSGLYEAPRQEQTQLTQPAANIYSSKKWSKPPQPLYTVTSAQSTKRADPHFQLRTQHF
TKPRDVLNLSDTVAWKELFELQHEDGYWECTERLSSFLNLDVDFFANVFLQEKGIRSFGV
KAHAEVLRLVATLLVLQLIRVKKLAVGQLLESLLRLKESQEPRPMHWEAVKRAVDWACRT
DRQYPCVCSRLEIGRDWESATRQLLGCDSPHPYSPLKPVLERRACVSVM
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgtttgaaaactgtactgtagtgttagatgtgaagaatgtcccttataaagag
aagaataagctgagattggctcttctggataatggaggaaacatatcttatgtcatcaac
aaagagtgctcttttgtagtcactagcagtgtgaatgagctgagcagtaaccggcagagc
agcatacagaagctccggatcccagtggttgggatgcagtatgtgtggagctgtctggac
gaagggcatctcctgcctttgacagagcatgatttggccccacagctggcttaccccacc
tctgaattcatctcttgtccagagggaaaagtgtcaacccacatacaagaaaaagaggag
ttcaaaggtcagactgagatagctgctcttgagaagggcggacacagtcttagcaggttc
agagtttacagaggcggcgaccatgagctgcctgaatttccttctcattttcaagtggcc
aagtattctgtttttgagatggtcaaacccaagactttgtctgtgttggagctgcagagt
ggcagaggacgaaaaggccagcagtatcgtgtgttgtcttcaatcttgcatgaagctgag
agcgcagtggtgcaggacaagcttgtgcactgcgtgacatctgaggatgctgtggaagcg
tatctgctgctgatgaaggagatggagacacagggattcacaaggtctcacacccttcct
cctgaggttgaacgattggcgtctcacagcctgcagcagcttcttttggaggagaagctg
aactgtagctcattatcccaggaagttggcgtctttgtggagctggtttggaccgaagct
ctcggatcccttagtaacatcctgacagtccctgtctccagaatcagccttaatgatgtg
agcagggtggagggattgttactgcaggcacaaaagactcagaaagaggatgaagtcaag
gccctgcttgaggaggtcaacacgcttctacccctcagaatgatcgatcctccttccaaa
cacaagcttgtgtctcagaaactagatctttgtcagctaataagagacattttgaatgtg
agtgaagccactctgggaagcccctcgccctcgtctctgggaaagtatcgagctctgagg
tgcagcattgaggttgttccaccacaaaaccctgagtttcatgttgtctctcaactgctt
catgaaaggcctgttcagattcagcagattctgcgcgtaagcagaggggtggagcttcaa
atgttttgggaggatataggcaacattaagcctctccttcactccactagtcccagtagt
tttgttggaatactgtcacgaggtctactgctgcccagagttggagtcgaacagcatgga
attgagaggacggatatcgggaatcttggaggaggaatctacttcagtgactctttaaac
actagtgtgaaatactccaagcccagtgtgactgacggctctcgattgttgttggtgtgt
gaagtggcgttgggccggtgcaaagacctgctgaagaaagacaccactttgacctgtgcc
cctgacggctaccacagtgtacatggagtccaccgcacgcccaacaggctctctgaattt
gaggatgatgagtttgttgtctataacacagagcagatcagactgaagtatgtggttcag
tacactctggagggagacgagttaaaggagttccagcctcatgtcaacacagttgtggag
ctcacacagctcactgacacatctgacgtcttgtccagtgatgacagtgagggtttggag
tctactaaaaaccctctggaagagatgactgcaggtttgctggacagcaatggtcagaaa
attcctcttcaggccgtcaatgtgaggtgcaagctgatggacctgctgtgtcaggtgata
atttttcagacctacacaaacaagagtcctgttcccattgaagcaaagtacgtctttccc
ctggaggagacggcagcagtgtgtggatttgaagcctttatcaatggaaaacacgttatt
ggaaaggtaaaggaaaaagagcaggctcgtaaggagtataagcaagccatagagaagggt
catggagcctacctgatggaccaggatgcacctgatgtattcactatcagcgtggggaac
cttcctcctggagccacagttttgatcaaggtgacgttcatcactgagttggtggtgaga
tcaggctctatagtcttctcattggctggcagcgtagcaccatggcaacagagtgccgcc
cttaatacgacaactcaggcaactgttgaaaagattggtgtgacggagcttcagtcagag
ggggagttttctctgtctatgtccatcgaaatgccttacgagatcatcaacttaagttct
tcacaccgcatcaaaaccaagatgaccgactgtaaggcagtggtcagcacattaccggga
cagactcttggatctgaagggttacaggtgtccttcagtctttctaatatccacatgccc
aggatgtgggtcgagaaccatccggataaatatagtcaggcctgcatgctggtgttttat
ccagactttaagtcaagcggggtttccagctctggagatccgtccagtgtgagcgatgtg
gtgattctgctggactcctccaagtccatgcagggagacgccatgctgaacgcccgcagg
attgcccttcaagtcctgaaatctctggaccgctcactgaagatcaacatcatctctttc
agcactgattacaaggaagcttttcctgcaccaatgcctttagatgaagcatctgaacca
gccagaaaatttattatgtcctgtagtggcgctggtggcggcactgagctgtggcgacct
ctccagagcctgagcctgctgtctccctcccggggcgtgaggaacatcctgctactctct
gatggacatgttcagaaccagcctctgaccctagagctggtccgagaaaactcccgccac
acgcgcctcttcacctgtggactcagcttgacagctaatcggcatatgctcagagctttg
gctcaagcaggaggaggaacatgtgaattttttgacacaaagatgaaacacacttgggct
gagaaggtccgcgctcaggttcagcgtatggagtctccaggctgcagatcagtggcagtg
aagtggcagcagtttaatcccacagcgcctcctcctgttcaagccccctcacagcttcac
agcctcttcagtgactgtcacactctcatatacggctttgtgccgcactgcactcaggcc
actctgtttggagatttgagtgggaatgagatcaaaacaatggtttcaaccacagaacta
caaaagacgaaaggaactttccttcacaagttaacagcaagagcgatcatcagagactat
gaagatggcattttaggcaacagtgaagcagaacatgaggggaagaaagcagagctgaag
tcctacatcattgagctcagtaaagagttctccatcttgtcccagttcacaagctttgtc
gccatcgaagagagggagcagaatgagcccgacagtggatggacagatattcctaaactc
atatcagaagaggatgtggatattttgccatatatgggctggagtgaagagaagctcatg
gttgaggacattatttgtgctgataatatggattcagaggaatggcgcagtagcggctcc
acatctcctgtccagttgttttcagctaaacgggctgctaaacgattatattatgatgca
aatgattcagaggatgactatgaggatccaattgaggattttgaaatggacttatctgca
gctctccctcgttcttgcttcagaagcagctggcgtccttcacgttttgacggtgctatt
cgcggttcttctagttcttatgtaagtgatccgaagtcggttcttcttgcatcagaggaa
cctactggtggtgtctcaatgagtgatagacttcctcctcccactgtagcctcaaagtct
cttaactttcaaattcactgttacaatgagtcagtagaatctctctcctcaaattataac
cttgcatcacagacagaagtgactcctatagtaaggacaatggaacctccctccggcgct
cgctggatgtctcctcgtccttctggtggtgccttgatgtccaaatctggctccatgagt
gacaggcttcctcctccacctccccctccccctgccgccaaggttgcctcctcagtcccg
cctccccttcatatttctgaatcagtggactctctcctctgtgaaacttatgctgatggc
cttcccctagcgctggaacttgaaggcccaactcctcctctctttgcaggtcctcctcca
aatcttagtcttgcttctgatccgttcttatcttccagggcccctcctccagctcctctt
tttggcaggccgagcacatctttttcaatggtgaaattccctgccgttcaatgtctctca
cagatccagcgtgacgcctcaactccccctatctttgaaggtcgtacttttcctcctcgt
cttgcatctaagcagtactcgcctatcactcctagttattctctgggatctttttgtggc
aaggcttcccgtgaatctagtgtccttcaaagtacgaatgagccgttgagcctttttggt
tcctcatcctctggactttatgaagcacctcgtcaagaacaaacacaactaacgcaacca
gcggcaaacatctacagcagcaaaaaatggagcaaaccaccacaaccactatacactgtg
acatctgcacaatcaacaaaaagggctgatcctcattttcaactaaggactcaacatttc
acaaaacctcgtgacgtcttgaatctgtctgacaccgttgcctggaaggagctgtttgag
cttcaacatgaggatggatactgggagtgcactgagagactgagcagcttcctcaacctg
gacgtagacttttttgccaatgtcttccttcaggagaaaggcattcgttcctttggtgtg
aaggctcatgctgaagttttgaggctggtggcgactctgctggtgctgcagctgatccgg
gtgaagaagctggcagtgggacagttgcttgagtctctcctccggctgaaagagtctcag
gagcccagaccgatgcactgggaggccgtgaagagggccgtggactgggcctgtcggaca
gacagacagtatccttgtgtgtgcagcaggctggagatcggccgggattgggaatcagct
acacgtcagctgctgggctgtgattctccacacccatattcccctctcaaacctgttctg
gagagacgtgcgtgtgtatcagtcatgtag
DBGET
integrated database retrieval system
