Pimephales promelas (fathead minnow): 120463679
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Entry
120463679 CDS
T08155
Symbol
lamb2l
Name
(RefSeq) laminin subunit beta-1
KO
K06243
laminin, beta 2
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04510
Focal adhesion
pprm04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120463679 (lamb2l)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120463679 (lamb2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
120463679
NCBI-ProteinID:
XP_039508885
LinkDB
All DBs
Position
Unknown
AA seq
1834 aa
AA seq
DB search
MMMAKYFSVLLLVLPAVAQEIPSAPHGCMEGSCYPATGNLLIGRAINLTATSTCGLDEPE
LYCIVSHLQDSDKCFICNSQEPYDAYNHRNSHRVENVIYQRDRRGELTWWQSVNGEENVS
IRLNLEAEFHFTHLIMKFKTFRPAAMMIERSSDFGRTWRPYRYFAYNCTKTFPRVPAHSL
RFIDEVICEERYSDIEPSTEGEVIYKVLDPAIHVNDPYGLDIQDLLRITNLRINFTKLHT
LGDNLLDRRPDVLQKYYYALHELVVRGSCFCYGHASECAPVPGVTTRDSGMIHGRCVCKH
NTVGLNCEFCRDFYHDAPWRPAETDNAHTCRECNCNGHSNQCHFDMAVYLATGNTSGGVC
DNCVHNTMGRNCETCKPFYYQDPARDIRDPNACVSCDCDPVGSVEGGVCDSHTDLDLGMI
GGQCRCKQNVMGQRCDYCKEGHYGLSLDNTLGCQPCNCDPRGITMRGAPCDQISGDCSCK
RYVTGRYCNQCLPEYWGISNDLAGCRPCDCDFGGSTSSRCLMDNGQCDCRPHLIGRKCSE
VQPGFFCASLDYYKYEAERAVGHSPDDPALPGNPRPQAETDCVQHLNNQLRRHRRHRQQQ
RAALRRIRQLQQTPSVSIVHRERQPGQMVTWTGPGFARVKDGAGLEFTISNIPYAMEYNI
MIRYEPESTEDWEAIVSVTSLNLPTSLRCGNMLPTEQMYTVTMPHHRRYIEMPRPFCFEP
NNQYVVSVRFQRHGVSHRHLTAFILIDSLVLIPRYEELPGFQGDDGPDERRRQEMEVYMC
LDSFTTLPMPALAELCTTLICSISAIIHNGALACQCDPQGSLSAECDKVGGQCHCKPNVI
GHQCDQCAPGTYGFGPYGCADCDCHSQGSVGHQCDPVTGQCPCRHGAIGRQCSDCQPGQW
GFPNCRQCQCNGHAESCDTDTGACYECRDFTAGQLCERCVNGFYGDPVLGSGEHCHPCPC
PGHPDSGHSNGASCQADYDSNQILCQCGEGYAGPRCDRCAPGYYGDPERPGGACRPCQCN
GNIDPQDPESCDPRTGQCLKCLYNTDGDSCSECKSGYYGNALSQDCRRCTCVTAGTLQGY
CTDGVCHCNEQTGHCPCKPNIIGHNCDQCAPNHWNFGSDFGCEPCGCVQPNALSTHCNMF
TGQCHCQPGFGGRQCNECEAFHWGDPRVQCEECNCHFLGSETAQCNRITGACECKEGASG
RRCDECARGFTGSFPKCVPCHPCFQLWDDIVCYVYRDLTHIKNVIAMILEKGEVPGVSDG
RILELEKKLAQVQDLIKDGDQEGTFNLISQAIDDLRAEIALTDGRLMGVIRDLNVTADLD
KALKQTLTALEKDLKDLNDTLHLLRRGLENSLTAGIAEQFENVRKYYQSSLNSEQRCNAS
VYGPQSPVEQSEDTRNHTEALLKERKDSFLRTVAANDRSLTELKEKAHEIDRNVRHLSNK
VCGGHGNASANSSCPDSPCGGAGCRDHDGALKCGGKGCNGTVGASVTALGHAEDVLKNLT
AASEEIQTVAKKLRDITTLTQTVKTQAKDTLDKAQSKKDLFENSNKILKDFIQKIRDFLN
EEGADPESIEKVAQQVLAISLPVNRTVMINIVKQIKESIDNLTNVEELINHTSEQLTKVK
DLLKRAQDAKTQAEGVSNNINKTIEALETSQSAIKKAEKEMTTALENLKNTQNITNTVDN
KLLNLDNSLMDVMMRLANLSHGVDLLKNKTEQNREMAKDAKAQSDNATQEAAGLQEELTN
AENLYKELKEKVDSVGGTGEGNVNQRAIEMKKEAEELLNKATMGMETLRKLERKLNKNEL
KMQNQRDELADLEKNVTDVREFIRLKVMGYNNCQ
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggccaaatatttcagtgtcctgcttctggttcttccagctgtggctcaggag
atcccctcagccccacatggctgcatggaagggagctgttatccggcaacagggaacctt
ctgattggccgtgctattaatctgaccgccacctccacctgtggcctggatgagcctgag
ctgtactgcatcgtcagtcatttgcaggattcagataagtgctttatatgtaactctcag
gagccatacgatgcctataatcacagaaacagccacagggtggagaatgtcatctaccag
agagaccgcagaggagaactcacatggtggcagtctgtaaatggagaggagaatgtcagt
attcgactaaatcttgaggcagagttccactttactcatctcataatgaagtttaagacg
tttagacctgctgctatgatgattgagcgttcttcagattttggacgtacatggaggcca
tatcgctacttcgcttacaactgcaccaagactttccccagggttcctgctcattctctt
cggtttattgatgaggtcatctgtgaggagcgttactctgacattgaaccgtccactgaa
ggagaggtcatctacaaagtgctggatcctgcgatccatgtcaacgacccatacggtctt
gacattcaggatttgttgcggatcactaacttacggataaacttcactaaactgcacacc
ctgggcgataacctgcttgaccgccgtcctgacgtgctgcagaaatattactatgcgctg
catgagctggttgtgcgcgggagttgcttctgctatggtcacgcgtcggagtgtgcacca
gtacctggagtgaccactagggattcaggcatgattcatggacgttgtgtgtgtaagcac
aacactgtgggattaaactgtgagttctgcagagatttctaccatgatgcaccctggagg
cccgccgagactgataacgcacacacctgcagggaatgcaactgtaacggtcactccaat
caatgtcattttgacatggcggtatatctggctactgggaacaccagtggaggcgtgtgt
gacaattgtgtccacaacaccatgggccgcaactgtgagacctgcaaacctttttactat
caggatccagctagagacatcagagacccaaatgcatgtgtctcctgtgactgtgacccc
gtgggctctgtagagggaggagtttgtgacagtcatactgatctggatctgggtatgatt
ggtggtcagtgtcgctgtaagcagaatgtcatgggtcagcgctgcgactactgcaaagag
ggacactatggactcagtcttgacaacacactgggatgccagccatgtaactgtgacccc
cgtgggatcaccatgcggggggccccatgtgatcagatcagcggagactgctcctgcaaa
agatacgtcactggtcgctactgtaatcagtgcctgcctgaatactggggaatcagcaat
gatctggcaggttgcagaccctgtgactgtgactttggtggttcaaccagcagcagatgc
ctgatggacaacggtcagtgtgactgtcggcctcatctgattggacggaagtgttctgaa
gttcagcctgggtttttctgtgcttctctggattattacaaatatgaagcagagagagct
gtaggtcactcccctgatgatcccgctcttcctggcaatccgagacctcaggctgagacc
gactgtgtgcagcatctcaacaatcagctgagaagacaccgccgtcaccgtcagcagcag
agggcagcactgagacgtatccgacagttgcaacaaacacccagcgtgagcatagtacac
agagagagacagccgggtcagatggtcacatggaccggaccgggctttgctcgggttaaa
gatggagctggcctagagttcaccatcagcaacatcccttacgccatggaatataacatc
atgatccgatacgagccagagtccacagaggactgggaggctatagtgagtgtgacatcc
ctgaatttacccacaagtctccgctgtggaaacatgctgcccacagagcagatgtacaca
gtcacaatgccccaccacaggaggtacattgaaatgccaaggcccttctgctttgaacca
aacaaccagtatgtggtgtccgtccgtttccagcgccacggcgtgtctcaccgacatctc
accgccttcattctgatcgactcacttgtgctgatacccaggtatgaggagcttcctggt
ttccagggtgacgacggcccagacgagcgtcgacggcaggagatggaggtctacatgtgt
ttggattccttcacgaccctgccgatgcctgcgctggcggagctgtgcaccacactcatc
tgcagcatctctgctatcatacataacggagccctggcatgtcagtgtgaccctcagggt
tcactgagtgcagagtgtgacaaagtgggaggtcaatgtcactgtaaacccaatgttatt
ggccatcaatgtgatcagtgtgcaccggggacgtacggatttgggccatatggctgcgct
gattgcgactgccactctcagggctctgtagggcatcagtgtgaccctgtgacgggtcag
tgtccgtgtcggcatggggcgattggtcgccagtgctctgactgccaaccaggtcagtgg
ggattccccaactgtaggcagtgtcaatgtaatggccacgctgagagctgtgacactgac
actggcgcctgctatgagtgcagagacttcacagctggacagctgtgtgagaggtgtgta
aacggtttctatggtgacccagtattgggttctggtgagcactgtcacccctgtccctgt
ccaggacaccctgacagcggacactccaatggagcttcctgtcaggcagactatgactct
aaccagatcctctgccagtgtggtgaaggatatgcaggtcctcgctgtgatcgctgcgct
cccggttactacggtgatcctgagcggcctggcggggcttgcaggccgtgccagtgcaac
gggaacattgatccccaggacccagagtcatgtgacccacgaaccggccaatgcctcaag
tgcctgtataacactgacggcgactcttgctctgagtgtaaatcaggttattatggaaat
gcactctcccaggactgtaggcgctgtacttgtgttactgctggcactttacagggctac
tgtactgatggagtatgtcactgtaatgagcagactggacattgcccctgcaaaccaaac
atcattggccacaactgtgaccagtgcgcccccaaccactggaacttcggctcggacttt
ggatgtgaaccctgtggatgcgtccagccaaatgccctcagcacccattgcaatatgttc
actggccagtgtcattgtcagccaggttttggaggacggcagtgcaatgagtgtgaggcg
ttccactggggtgatcccagagtacagtgtgaagagtgtaactgccacttcctggggtcc
gagacagctcagtgtaaccgcataacaggtgcatgtgagtgtaaggagggagcttcagga
cgtcgctgcgacgagtgcgcccgtggctttaccggaagcttccccaagtgtgttccctgc
catccctgcttccagctatgggatgatattgtgtgctacgtctaccgagatctgacccac
atcaagaatgtcattgccatgattctggagaagggtgaggtgcccggagtcagtgacggc
cgcatccttgagctggagaagaagctggcacaggttcaagatctgatcaaagatggagac
caagagggaacctttaacttaatcagccaggctattgatgacttgagagcagagattgct
ttgactgatgggcgtctgatgggtgtgattcgggacctgaatgtgacggcagaccttgac
aaagctctgaaacaaaccctaacggcactggagaaagacctgaaagacttgaacgataca
cttcacctattgcgcagagggctcgagaactccctcactgctggaatagcagagcaattt
gaaaatgtgcgcaagtactaccagagttcgctgaattcagagcagcgctgtaatgcctcc
gtatacggaccccaaagtcccgtggaacagtctgaagacacacgtaaccatactgaagcc
ttgctgaaagagagaaaggacagcttcctgcgtacagttgctgccaatgataggtctttg
actgaactaaaggagaaagctcacgagatagaccgaaatgtccgtcatctcagcaacaag
gtatgtggtggccatggcaatgctagtgcaaatagcagctgtcctgatagcccttgtgga
ggagctggttgtcgtgaccatgacggtgcgctgaagtgtggagggaaagggtgtaatgga
accgttggggcctcagtgacggccctgggccacgctgaagatgttcttaagaacctgacc
gctgccagcgaggagatacaaaccgtggctaaaaagcttcgagacatcaccacactcacc
cagactgtgaagactcaagcgaaggatactctcgataaagcccagagcaagaaagatctc
tttgagaactccaacaagatactcaaagacttcattcagaagattagagattttttgaat
gaggagggagcagatccagaaagcattgaaaaagtggcccagcaggttttggcgatctcc
ttgccagtcaacaggaccgtaatgatcaacatagtcaaacaaatcaaagaaagcatcgac
aacctcaccaacgtggaggagctgatcaaccacacctcagagcaactgaccaaggtcaag
gatctgcttaaaagagcacaagatgcaaagacacaagctgaaggagtgagcaataatatc
aataaaacgatagaagcacttgaaacctctcaaagtgctataaagaaagctgagaaggaa
atgaccacagcactggaaaacctcaaaaatacccagaacatcactaacacggttgacaac
aaactcttaaatttagacaacagcctcatggatgtgatgatgcgattggccaatttgtcg
catggagtggatttattaaagaataaaacggagcagaacagggagatggcaaaagatgcc
aaagcccagtcggacaatgcaactcaagaggctgctggacttcaagaggaactgacaaat
gctgagaatctgtataaggagctgaaagaaaaagtagactcagtaggaggaaccggagag
ggtaatgttaaccagagagccatagagatgaagaaagaagcagaggaactgctgaataag
gccaccatgggcatggaaaccctcagaaaactggagagaaagttaaacaagaacgagctg
aagatgcagaatcagcgtgatgaactggcagatctggagaaaaacgttacagacgtcaga
gaatttatcagattaaaagtcatgggctacaacaactgtcagtaa
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integrated database retrieval system