Pimephales promelas (fathead minnow): 120466930
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Entry
120466930 CDS
T08155
Name
(RefSeq) zinc-activated ligand-gated ion channel-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120466930
Ion channels [BR:
pprm04040
]
Ligand-gated channels
Serotonin (5-HT3)
120466930
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Claudin_3
Motif
Other DBs
NCBI-GeneID:
120466930
NCBI-ProteinID:
XP_039511569
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MQISCRVKVNMEWIDQDLRWNENTSNASYVLLPVDKIWTPVLVLDNAIDVTMKPYTNDVL
VSKYGNVDYALILYIAVGCDDISLFTYPFVNGDCCVAINGWSQRGCGLTVNPFTNISVIN
SIQGEWKTVNVTIPQETPENRTCLLVSLSISPFSAVVTLILPSVLIMLADLVTFSLPVQG
GERNSLKVTLVLSFTMFLLILNDHLSSGGQCSPILHYHFCFCLVNLVLSMVVSIVLTRLT
MDNRFLPSKNIKTPQTTASLGQDEADLGVITTTKSSDLLSEVASLQKIVNFLENIDQKEQ
VAKSNEAFVDRLDKICFCFFLFIDIIYVIIVIIVTNTGICKETKRNIWDNEDLLDDHENY
TYYSSYYYY
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgcaaataagctgccgtgtcaaggtaaacatggagtggattgatcaggatctaaggtgg
aatgaaaatacatctaatgcttcatacgttttgttaccagttgacaaaatatggactcct
gtgttagttttggacaatgcgatagatgtaaccatgaagccgtacacaaatgatgtactg
gtgtcgaagtatggaaatgtggactatgcccttatcttgtacatagcagtgggctgtgat
gatatcagccttttcacctatccctttgtgaatggcgattgttgtgtggcgatcaatgga
tggagccaaagaggttgtgggcttactgtgaatccatttacaaacatatctgtgattaac
agcattcaaggagagtggaaaactgtgaatgtgacaataccacaagaaacacctgaaaac
cgcacctgtctcttggtctctttatccatcagtcctttcagtgctgttgtgaccctgatc
ctgcccagtgtgttaataatgctggctgacctggtgaccttttctctgcccgttcaagga
ggagaacgcaacagccttaaggtcaccttagtcctgagtttcaccatgttcctcctcatc
ctcaatgatcacctaagcagtggtggacaatgtagccctatccttcattatcacttctgc
ttctgtctggtcaatctggtgttgagcatggtggtgtctattgtgttgacacgtctgaca
atggataacagatttctgccttcaaaaaacatcaaaaccccccaaacaactgccagcctt
ggtcaggatgaagcagatcttggtgtgattactacaacaaaatccagcgatctgctttca
gaggtggcttccctccaaaaaattgtgaactttttggaaaacattgaccaaaaagagcaa
gtggcaaagagcaacgaggcgtttgttgaccgcttggacaaaatctgcttctgttttttt
ttgttcattgacattatttatgtcatcattgttatcattgtcacaaatacagggatttgc
aaagaaacaaagaggaatatctgggacaatgaagatttgctggatgatcatgaaaactac
acatattattcttcttattattattactga
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